BLASTX nr result
ID: Cimicifuga21_contig00036273
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00036273
(467 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28135.3| unnamed protein product [Vitis vinifera] 192 2e-47
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi... 192 2e-47
gb|ACZ98537.1| PPR motif protein [Malus x domestica] 188 5e-46
ref|XP_002308315.1| predicted protein [Populus trichocarpa] gi|2... 181 6e-44
ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containi... 177 1e-42
>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 192 bits (488), Expect = 2e-47
Identities = 100/154 (64%), Positives = 114/154 (74%)
Frame = +2
Query: 5 EALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXXX 184
+AL C M+SENLRFDSVTL+S+LSA A T N++LGKEGH YCIR
Sbjct: 1462 KALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSII 1521
Query: 185 XMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNVI 364
MYAKC RI+DAR VF TT +DLVLWNTL+AAYA++G SGEALKLFYQMQ + V PNVI
Sbjct: 1522 DMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVI 1581
Query: 365 SWNSVIWGFLRIGQVVEAENMFQWMQLSGMQPNL 466
SWNSVI GFLR GQV EA++MF MQ G QPNL
Sbjct: 1582 SWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNL 1615
Score = 79.3 bits (194), Expect = 3e-13
Identities = 40/140 (28%), Positives = 73/140 (52%)
Frame = +2
Query: 2 EEALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXX 181
E+AL ++M+ + D+ L ++L A + + + LGK HGY ++
Sbjct: 1259 EDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSL 1318
Query: 182 XXMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNV 361
MY KC + DAR VF K++V WN++I Y + G + EA+ +FY M++EG++P
Sbjct: 1319 VDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTR 1378
Query: 362 ISWNSVIWGFLRIGQVVEAE 421
++ S + + ++E +
Sbjct: 1379 VTVASFLSASANLDALIEGK 1398
Score = 78.2 bits (191), Expect = 7e-13
Identities = 45/142 (31%), Positives = 77/142 (54%)
Frame = +2
Query: 5 EALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXXX 184
EA+ +M+ +R ++ S+L A + +L G+ HG+ R+
Sbjct: 1633 EAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLV 1692
Query: 185 XMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNVI 364
MYAKC I++A+ VF + + K+L ++N +I+AYA G + EAL LF +Q EG++P+ I
Sbjct: 1693 DMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSI 1752
Query: 365 SWNSVIWGFLRIGQVVEAENMF 430
++ S++ G V E N+F
Sbjct: 1753 TFTSILSACSHAGLVNEGLNLF 1774
Score = 68.9 bits (167), Expect = 4e-10
Identities = 42/127 (33%), Positives = 65/127 (51%)
Frame = +2
Query: 2 EEALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXX 181
+EA+ M+ E + VT+AS LSA AN L GK+GH I N
Sbjct: 1360 QEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSI 1419
Query: 182 XXMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNV 361
Y+K I DA VFS KD+V WN LI++Y + G+AL + + M+ E ++ +
Sbjct: 1420 INFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDS 1479
Query: 362 ISWNSVI 382
++ +S++
Sbjct: 1480 VTLSSIL 1486
>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 192 bits (488), Expect = 2e-47
Identities = 100/154 (64%), Positives = 114/154 (74%)
Frame = +2
Query: 5 EALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXXX 184
+AL C M+SENLRFDSVTL+S+LSA A T N++LGKEGH YCIR
Sbjct: 367 KALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSII 426
Query: 185 XMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNVI 364
MYAKC RI+DAR VF TT +DLVLWNTL+AAYA++G SGEALKLFYQMQ + V PNVI
Sbjct: 427 DMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVI 486
Query: 365 SWNSVIWGFLRIGQVVEAENMFQWMQLSGMQPNL 466
SWNSVI GFLR GQV EA++MF MQ G QPNL
Sbjct: 487 SWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNL 520
Score = 79.3 bits (194), Expect = 3e-13
Identities = 40/140 (28%), Positives = 73/140 (52%)
Frame = +2
Query: 2 EEALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXX 181
E+AL ++M+ + D+ L ++L A + + + LGK HGY ++
Sbjct: 164 EDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSL 223
Query: 182 XXMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNV 361
MY KC + DAR VF K++V WN++I Y + G + EA+ +FY M++EG++P
Sbjct: 224 VDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTR 283
Query: 362 ISWNSVIWGFLRIGQVVEAE 421
++ S + + ++E +
Sbjct: 284 VTVASFLSASANLDALIEGK 303
Score = 78.2 bits (191), Expect = 7e-13
Identities = 45/142 (31%), Positives = 77/142 (54%)
Frame = +2
Query: 5 EALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXXX 184
EA+ +M+ +R ++ S+L A + +L G+ HG+ R+
Sbjct: 538 EAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLV 597
Query: 185 XMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNVI 364
MYAKC I++A+ VF + + K+L ++N +I+AYA G + EAL LF +Q EG++P+ I
Sbjct: 598 DMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSI 657
Query: 365 SWNSVIWGFLRIGQVVEAENMF 430
++ S++ G V E N+F
Sbjct: 658 TFTSILSACSHAGLVNEGLNLF 679
Score = 68.9 bits (167), Expect = 4e-10
Identities = 42/127 (33%), Positives = 65/127 (51%)
Frame = +2
Query: 2 EEALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXX 181
+EA+ M+ E + VT+AS LSA AN L GK+GH I N
Sbjct: 265 QEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSI 324
Query: 182 XXMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNV 361
Y+K I DA VFS KD+V WN LI++Y + G+AL + + M+ E ++ +
Sbjct: 325 INFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDS 384
Query: 362 ISWNSVI 382
++ +S++
Sbjct: 385 VTLSSIL 391
>gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 188 bits (477), Expect = 5e-46
Identities = 97/155 (62%), Positives = 115/155 (74%)
Frame = +2
Query: 2 EEALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXX 181
++AL C M+ ENLRFDSVTLA+L+SAFA+ RNL+LGKEGH YCIRN
Sbjct: 283 DKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSI 342
Query: 182 XXMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNV 361
MYAKC +I AR VF+ + KDL+LWNT++AA+AELG SGEAL LFYQMQLE V PNV
Sbjct: 343 VDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNV 402
Query: 362 ISWNSVIWGFLRIGQVVEAENMFQWMQLSGMQPNL 466
ISWNS+I GFL GQV EA++MF MQ G+QPNL
Sbjct: 403 ISWNSLILGFLNSGQVNEAKDMFLQMQSLGVQPNL 437
Score = 70.9 bits (172), Expect = 1e-10
Identities = 42/130 (32%), Positives = 67/130 (51%)
Frame = +2
Query: 2 EEALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXX 181
EEA+ +M+ E + VTL+S LSA AN L+ GK+GH +
Sbjct: 182 EEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSL 241
Query: 182 XXMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNV 361
Y+K I DA VFS KD+V WN LI+ Y ++G +AL + + M+LE ++ +
Sbjct: 242 INFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDS 301
Query: 362 ISWNSVIWGF 391
++ +++ F
Sbjct: 302 VTLATLMSAF 311
Score = 69.7 bits (169), Expect = 2e-10
Identities = 40/142 (28%), Positives = 76/142 (53%)
Frame = +2
Query: 5 EALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXXX 184
EA+ T +M+ ++ + V++ +L A N +L++G+ HGY IR+
Sbjct: 455 EAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLV 514
Query: 185 XMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNVI 364
MYAKC + A+ VF + K+L ++N +I+ +A G + EAL L+ ++ EG++P+ I
Sbjct: 515 DMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNI 574
Query: 365 SWNSVIWGFLRIGQVVEAENMF 430
++ + ++ V E +F
Sbjct: 575 TFTNALYACSHAMMVSEGLELF 596
>ref|XP_002308315.1| predicted protein [Populus trichocarpa] gi|222854291|gb|EEE91838.1|
predicted protein [Populus trichocarpa]
Length = 545
Score = 181 bits (459), Expect = 6e-44
Identities = 93/155 (60%), Positives = 111/155 (71%)
Frame = +2
Query: 2 EEALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXX 181
E+AL C M+ EN+RFDSVTLAS+LSA + N+ELGKEGH YCIRN
Sbjct: 297 EKALDLCHLMRLENMRFDSVTLASILSACSIMGNIELGKEGHCYCIRNYLVSDLAVANSM 356
Query: 182 XXMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNV 361
MYAKC +I DAR VF+ T KDL+LWNTL+ AYAELG +GE LKLFY MQLE V PNV
Sbjct: 357 IDMYAKCEKIADARHVFNSTMNKDLLLWNTLLTAYAELGVTGEVLKLFYGMQLESVPPNV 416
Query: 362 ISWNSVIWGFLRIGQVVEAENMFQWMQLSGMQPNL 466
+SWN+VI GF+R GQ+ EA++MF MQ G+ PNL
Sbjct: 417 MSWNAVILGFIRNGQINEAQDMFSHMQAVGIHPNL 451
Score = 76.3 bits (186), Expect = 3e-12
Identities = 43/151 (28%), Positives = 73/151 (48%)
Frame = +2
Query: 5 EALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXXX 184
EAL +M + D+ + ++L A A + + G+ HGY ++
Sbjct: 96 EALMGLCEMIDTGILADNFVVPNILKACAALQWISFGRGVHGYVVKMGFDRCVFVSSSLV 155
Query: 185 XMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNVI 364
Y KC + DAR VF + K++V WN++I +Y + GF EA ++F +M+LE V+PN +
Sbjct: 156 DAYGKCGILEDARKVFDNMSDKNVVTWNSMIGSYVQNGFDVEAARVFSEMRLEDVEPNQV 215
Query: 365 SWNSVIWGFLRIGQVVEAENMFQWMQLSGMQ 457
+ S + +G V E + L G +
Sbjct: 216 TLLSFLSASANLGAVEEGKQAHAIAVLGGYE 246
Score = 66.6 bits (161), Expect = 2e-09
Identities = 40/126 (31%), Positives = 63/126 (50%)
Frame = +2
Query: 5 EALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXXX 184
EA +M+ E++ + VTL S LSA AN +E GK+ H +
Sbjct: 197 EAARVFSEMRLEDVEPNQVTLLSFLSASANLGAVEEGKQAHAIAVLGGYELDSILGGSIL 256
Query: 185 XMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNVI 364
Y+K I DA VF + KD V WN LI++Y + G +AL L + M+LE ++ + +
Sbjct: 257 NFYSKVGLIKDAELVFGMMLEKDAVAWNLLISSYVQYGQVEKALDLCHLMRLENMRFDSV 316
Query: 365 SWNSVI 382
+ S++
Sbjct: 317 TLASIL 322
>ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 177 bits (448), Expect = 1e-42
Identities = 89/155 (57%), Positives = 111/155 (71%)
Frame = +2
Query: 2 EEALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXX 181
+ AL C M+SENLRFDSVTLAS+++A A++RNL+LGKEGH +C+RN
Sbjct: 365 DRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSI 424
Query: 182 XXMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNV 361
MYAKC ++ AR VF T +DL++WNTL+AAYAE G SGE LKLFYQMQLEG+ PNV
Sbjct: 425 IDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNV 484
Query: 362 ISWNSVIWGFLRIGQVVEAENMFQWMQLSGMQPNL 466
ISWNSVI G L G+V +A++ F MQ G+ PNL
Sbjct: 485 ISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNL 519
Score = 75.5 bits (184), Expect = 4e-12
Identities = 45/143 (31%), Positives = 77/143 (53%)
Frame = +2
Query: 2 EEALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXX 181
+EA T M+ ++ +S++++SLLSA + +L G+ H Y R+
Sbjct: 536 DEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSL 595
Query: 182 XXMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNV 361
MYAKC IN A+ VF + K+L ++N +I+ YA G + EAL LF +++ E ++P+
Sbjct: 596 VNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDE 655
Query: 362 ISWNSVIWGFLRIGQVVEAENMF 430
I++ S++ G V E +F
Sbjct: 656 ITFTSILSACGHAGLVREGLELF 678
Score = 70.1 bits (170), Expect = 2e-10
Identities = 39/152 (25%), Positives = 69/152 (45%)
Frame = +2
Query: 2 EEALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXX 181
+EAL +M L D+ + A R + GK H Y ++
Sbjct: 163 QEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSL 222
Query: 182 XXMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNV 361
MY KC +A+ VF K++V WN++I + + G + EA++ FY+M++EGV P
Sbjct: 223 LDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQ 282
Query: 362 ISWNSVIWGFLRIGQVVEAENMFQWMQLSGMQ 457
++ +S + + + E + LSG++
Sbjct: 283 VTLSSFLSASANLSVIDEGKQGHALAVLSGLE 314
Score = 68.2 bits (165), Expect = 7e-10
Identities = 40/126 (31%), Positives = 62/126 (49%)
Frame = +2
Query: 5 EALYTCLQMKSENLRFDSVTLASLLSAFANTRNLELGKEGHGYCIRNXXXXXXXXXXXXX 184
EA+ T +M+ E + VTL+S LSA AN ++ GK+GH + +
Sbjct: 265 EAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLI 324
Query: 185 XMYAKCARINDARWVFSITTPKDLVLWNTLIAAYAELGFSGEALKLFYQMQLEGVQPNVI 364
Y+K + DA VFS KD V WN L++ Y G AL L + MQ E ++ + +
Sbjct: 325 NFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSV 384
Query: 365 SWNSVI 382
+ S++
Sbjct: 385 TLASIM 390