BLASTX nr result

ID: Cimicifuga21_contig00036207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036207
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABX09994.1| chloroplast polyphenol oxidase [Taraxacum officin...    57   2e-06

>gb|ABX09994.1| chloroplast polyphenol oxidase [Taraxacum officinale]
          Length = 599

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 45/125 (36%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
 Frame = -2

Query: 386 TVTTPTNSNFHGRSSNA------RPSNAPTSSCKRFFSASSKQKQEDENVLNEKGSSVVD 225
           T  TPT       SSN         +  PT        A +  K  D++  ++  S  +D
Sbjct: 10  TTLTPTGGRSFSSSSNYSFSFSFNSTQVPTPKTLNHRHAVTSCKSADDHH-HDIDSGTLD 68

Query: 224 RRNVXXXXXXXXGATATFGNR--AVADPIQPPDLTQCGMACDPNLGDLDENGNPTGEYVD 51
           RRNV        GA ATFG+   A ADPI  PDLTQCG A      D+   G  T    D
Sbjct: 69  RRNVLLRLGGLYGAAATFGSNSLAFADPIMAPDLTQCGPA------DIPAGGIVT----D 118

Query: 50  CCPPY 36
           CCPP+
Sbjct: 119 CCPPF 123


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