BLASTX nr result

ID: Cimicifuga21_contig00036199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036199
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155654.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   259   2e-67
ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   259   2e-67
emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]   258   3e-67
ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|2...   253   1e-65
ref|XP_002521433.1| XPA-binding protein, putative [Ricinus commu...   252   3e-65

>ref|XP_004155654.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 650

 Score =  259 bits (661), Expect = 2e-67
 Identities = 122/145 (84%), Positives = 142/145 (97%)
 Frame = +2

Query: 2   ELMKRATAEPSLKVKQRVAADGNEPVQMKLHKSLRLWSFYVDLEETLGTLESTRAVYERI 181
           ELM+RATAEPS++VK++VAADGNEPVQMK+HKSLRLW+FYVDLEE+LGTLESTRAVYERI
Sbjct: 218 ELMRRATAEPSVEVKRKVAADGNEPVQMKVHKSLRLWTFYVDLEESLGTLESTRAVYERI 277

Query: 182 VDLKIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFRYPHVKDIWLTYISKFLKRYGK 361
           +DL+IATPQIIINYALLLEEHKYFEDAFKVYERGVKIF+YPHVKDIW+TY+SKF+KRYGK
Sbjct: 278 LDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGK 337

Query: 362 TKLERARQLFDHALENAPAEDLKQL 436
           TKLERAR+LF+HA+E APA+ ++ L
Sbjct: 338 TKLERARELFEHAVETAPADSVRPL 362


>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score =  259 bits (661), Expect = 2e-67
 Identities = 122/145 (84%), Positives = 142/145 (97%)
 Frame = +2

Query: 2   ELMKRATAEPSLKVKQRVAADGNEPVQMKLHKSLRLWSFYVDLEETLGTLESTRAVYERI 181
           ELM+RATAEPS++VK++VAADGNEPVQMK+HKSLRLW+FYVDLEE+LGTLESTRAVYERI
Sbjct: 484 ELMRRATAEPSVEVKRKVAADGNEPVQMKVHKSLRLWTFYVDLEESLGTLESTRAVYERI 543

Query: 182 VDLKIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFRYPHVKDIWLTYISKFLKRYGK 361
           +DL+IATPQIIINYALLLEEHKYFEDAFKVYERGVKIF+YPHVKDIW+TY+SKF+KRYGK
Sbjct: 544 LDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGK 603

Query: 362 TKLERARQLFDHALENAPAEDLKQL 436
           TKLERAR+LF+HA+E APA+ ++ L
Sbjct: 604 TKLERARELFEHAVETAPADSVRPL 628


>emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]
          Length = 920

 Score =  258 bits (659), Expect = 3e-67
 Identities = 122/145 (84%), Positives = 142/145 (97%)
 Frame = +2

Query: 2   ELMKRATAEPSLKVKQRVAADGNEPVQMKLHKSLRLWSFYVDLEETLGTLESTRAVYERI 181
           ELM+RATAEPS++VK++VAADGNEPVQMKLHKSLR+W+FYVDLEE+LGTLESTRAVYERI
Sbjct: 481 ELMRRATAEPSVEVKRKVAADGNEPVQMKLHKSLRIWTFYVDLEESLGTLESTRAVYERI 540

Query: 182 VDLKIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFRYPHVKDIWLTYISKFLKRYGK 361
           +DL+IATPQIIINY+LLLEEHKYFEDAFKVYERGVKIF+YPHVKDIW+TY+SKF+KRYGK
Sbjct: 541 LDLRIATPQIIINYSLLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGK 600

Query: 362 TKLERARQLFDHALENAPAEDLKQL 436
           +KLERAR+LF+HA+E APAE +K L
Sbjct: 601 SKLERARELFEHAVEMAPAESVKPL 625


>ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|222847967|gb|EEE85514.1|
           predicted protein [Populus trichocarpa]
          Length = 908

 Score =  253 bits (645), Expect = 1e-65
 Identities = 120/145 (82%), Positives = 140/145 (96%)
 Frame = +2

Query: 2   ELMKRATAEPSLKVKQRVAADGNEPVQMKLHKSLRLWSFYVDLEETLGTLESTRAVYERI 181
           EL++RATAEPS++VK+RVAADG+EPVQ+K+HKSLRLW+FYVDLEE LGTLESTRAVYERI
Sbjct: 479 ELLRRATAEPSVEVKRRVAADGDEPVQIKVHKSLRLWAFYVDLEEGLGTLESTRAVYERI 538

Query: 182 VDLKIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFRYPHVKDIWLTYISKFLKRYGK 361
           +DL+IATPQIIINYA LLEEHKYFEDAFKVYERGVKIF+YPHVKDIW+TY+SKF+KRYGK
Sbjct: 539 LDLRIATPQIIINYAWLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGK 598

Query: 362 TKLERARQLFDHALENAPAEDLKQL 436
           TKLERAR+LF+HA+E APA+ +K L
Sbjct: 599 TKLERARELFEHAIEMAPADSVKPL 623


>ref|XP_002521433.1| XPA-binding protein, putative [Ricinus communis]
           gi|223539332|gb|EEF40923.1| XPA-binding protein,
           putative [Ricinus communis]
          Length = 916

 Score =  252 bits (643), Expect = 3e-65
 Identities = 120/145 (82%), Positives = 139/145 (95%)
 Frame = +2

Query: 2   ELMKRATAEPSLKVKQRVAADGNEPVQMKLHKSLRLWSFYVDLEETLGTLESTRAVYERI 181
           EL++RATAEPS++VK+RVAADGNEPVQMK+HK LRLW+FYVDLEE LG LESTRAVYERI
Sbjct: 479 ELLRRATAEPSVEVKRRVAADGNEPVQMKVHKCLRLWTFYVDLEEGLGDLESTRAVYERI 538

Query: 182 VDLKIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFRYPHVKDIWLTYISKFLKRYGK 361
           +DLKIATPQIIIN+ALLLEEHKYFEDAFKVYERGVKIF+YPHVKDIW+TY+SKF+KRYGK
Sbjct: 539 LDLKIATPQIIINFALLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGK 598

Query: 362 TKLERARQLFDHALENAPAEDLKQL 436
           TKLERAR+LF+HA++ APA+ +K L
Sbjct: 599 TKLERARELFEHAIDMAPADAVKPL 623


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