BLASTX nr result
ID: Cimicifuga21_contig00036160
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00036160 (294 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF06037.1|AC009360_2 Contains 3 PF|00400 WD40, G-beta repeat... 55 8e-06 ref|NP_176683.1| WD40 domain-containing protein [Arabidopsis tha... 55 8e-06 gb|AAN17449.1| Unknown protein [Arabidopsis thaliana] 55 8e-06 >gb|AAF06037.1|AC009360_2 Contains 3 PF|00400 WD40, G-beta repeat domains [Arabidopsis thaliana] Length = 365 Score = 54.7 bits (130), Expect = 8e-06 Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 1/39 (2%) Frame = +1 Query: 1 AEVNTKSRLTCLAGSSLKSVRRPQIGSSIPAK-EQDQED 114 AE NTKSRLTCLAGS+LKS+RRPQIG P K +++ ED Sbjct: 325 AETNTKSRLTCLAGSALKSMRRPQIGKQEPQKVDEEHED 363 >ref|NP_176683.1| WD40 domain-containing protein [Arabidopsis thaliana] gi|53828631|gb|AAU94425.1| At1g65030 [Arabidopsis thaliana] gi|332196196|gb|AEE34317.1| WD40 domain-containing protein [Arabidopsis thaliana] Length = 345 Score = 54.7 bits (130), Expect = 8e-06 Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 1/39 (2%) Frame = +1 Query: 1 AEVNTKSRLTCLAGSSLKSVRRPQIGSSIPAK-EQDQED 114 AE NTKSRLTCLAGS+LKS+RRPQIG P K +++ ED Sbjct: 305 AETNTKSRLTCLAGSALKSMRRPQIGKQEPQKVDEEHED 343 >gb|AAN17449.1| Unknown protein [Arabidopsis thaliana] Length = 345 Score = 54.7 bits (130), Expect = 8e-06 Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 1/39 (2%) Frame = +1 Query: 1 AEVNTKSRLTCLAGSSLKSVRRPQIGSSIPAK-EQDQED 114 AE NTKSRLTCLAGS+LKS+RRPQIG P K +++ ED Sbjct: 305 AETNTKSRLTCLAGSALKSMRRPQIGKQEPQKVDEEHED 343