BLASTX nr result

ID: Cimicifuga21_contig00036160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036160
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF06037.1|AC009360_2 Contains 3 PF|00400 WD40, G-beta repeat...    55   8e-06
ref|NP_176683.1| WD40 domain-containing protein [Arabidopsis tha...    55   8e-06
gb|AAN17449.1| Unknown protein [Arabidopsis thaliana]                  55   8e-06

>gb|AAF06037.1|AC009360_2 Contains 3 PF|00400 WD40, G-beta repeat domains [Arabidopsis
           thaliana]
          Length = 365

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = +1

Query: 1   AEVNTKSRLTCLAGSSLKSVRRPQIGSSIPAK-EQDQED 114
           AE NTKSRLTCLAGS+LKS+RRPQIG   P K +++ ED
Sbjct: 325 AETNTKSRLTCLAGSALKSMRRPQIGKQEPQKVDEEHED 363


>ref|NP_176683.1| WD40 domain-containing protein [Arabidopsis thaliana]
           gi|53828631|gb|AAU94425.1| At1g65030 [Arabidopsis
           thaliana] gi|332196196|gb|AEE34317.1| WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 345

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = +1

Query: 1   AEVNTKSRLTCLAGSSLKSVRRPQIGSSIPAK-EQDQED 114
           AE NTKSRLTCLAGS+LKS+RRPQIG   P K +++ ED
Sbjct: 305 AETNTKSRLTCLAGSALKSMRRPQIGKQEPQKVDEEHED 343


>gb|AAN17449.1| Unknown protein [Arabidopsis thaliana]
          Length = 345

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = +1

Query: 1   AEVNTKSRLTCLAGSSLKSVRRPQIGSSIPAK-EQDQED 114
           AE NTKSRLTCLAGS+LKS+RRPQIG   P K +++ ED
Sbjct: 305 AETNTKSRLTCLAGSALKSMRRPQIGKQEPQKVDEEHED 343


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