BLASTX nr result

ID: Cimicifuga21_contig00036141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036141
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
emb|CBI38862.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28
ref|XP_003533639.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25

>ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g01970-like [Cucumis sativus]
           gi|449480346|ref|XP_004155867.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g01970-like [Cucumis sativus]
          Length = 404

 Score =  135 bits (340), Expect = 3e-30
 Identities = 65/94 (69%), Positives = 78/94 (82%)
 Frame = +2

Query: 2   NAHRVAGQSDEARSVFENLRRAGLEPSDKCVALMLDVYEKENRLNMALDLLIDLEKDNIT 181
           NA+ +AGQS EA+  F+N+RRAG+EPSDKC+AL L  YEKENRLN AL+LLIDLEKDN+ 
Sbjct: 309 NAYLMAGQSREAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNSALELLIDLEKDNVM 368

Query: 182 VGKEASEVLVKWFRRLGVVEEVALVLSEYATKEV 283
           VGKEAS++L  W +RLGVVEEV +VL EY  KEV
Sbjct: 369 VGKEASKILAAWLKRLGVVEEVEIVLREYTEKEV 402


>emb|CBI38862.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/93 (66%), Positives = 77/93 (82%)
 Frame = +2

Query: 2   NAHRVAGQSDEARSVFENLRRAGLEPSDKCVALMLDVYEKENRLNMALDLLIDLEKDNIT 181
           NA+RVAGQ+ +A   FEN+RR+GL+P+DK +ALML  YEKEN+LN ALD LIDLE+D I 
Sbjct: 252 NAYRVAGQTQKAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFLIDLERDGIV 311

Query: 182 VGKEASEVLVKWFRRLGVVEEVALVLSEYATKE 280
           +GKEASE+L  WF+RLGVV+EV LVL EY+ KE
Sbjct: 312 LGKEASELLAAWFQRLGVVKEVELVLREYSAKE 344


>ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g01970-like [Vitis vinifera]
          Length = 352

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/93 (66%), Positives = 77/93 (82%)
 Frame = +2

Query: 2   NAHRVAGQSDEARSVFENLRRAGLEPSDKCVALMLDVYEKENRLNMALDLLIDLEKDNIT 181
           NA+RVAGQ+ +A   FEN+RR+GL+P+DK +ALML  YEKEN+LN ALD LIDLE+D I 
Sbjct: 252 NAYRVAGQTQKAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFLIDLERDGIV 311

Query: 182 VGKEASEVLVKWFRRLGVVEEVALVLSEYATKE 280
           +GKEASE+L  WF+RLGVV+EV LVL EY+ KE
Sbjct: 312 LGKEASELLAAWFQRLGVVKEVELVLREYSAKE 344


>ref|XP_003533639.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g01970-like [Glycine max]
          Length = 356

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/94 (62%), Positives = 76/94 (80%)
 Frame = +2

Query: 2   NAHRVAGQSDEARSVFENLRRAGLEPSDKCVALMLDVYEKENRLNMALDLLIDLEKDNIT 181
           NA+ +AGQS +A   FEN+RRAG++PSDKC+A +L  YEKE+++N AL+ LIDLE+D I 
Sbjct: 260 NAYAMAGQSQKALIAFENMRRAGIKPSDKCIASVLVAYEKESKINTALEFLIDLERDGIM 319

Query: 182 VGKEASEVLVKWFRRLGVVEEVALVLSEYATKEV 283
           VG+EAS VL KWFR+LGVVEEV LVL ++A  EV
Sbjct: 320 VGEEASAVLAKWFRKLGVVEEVELVLRDFAIIEV 353


>ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|222861503|gb|EEE99045.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/90 (64%), Positives = 73/90 (81%)
 Frame = +2

Query: 2   NAHRVAGQSDEARSVFENLRRAGLEPSDKCVALMLDVYEKENRLNMALDLLIDLEKDNIT 181
           NA+ +AGQS  A + FEN+ RAG+EP+D+CVAL+L  YEKEN+LN ALD LI LE++ + 
Sbjct: 316 NAYGMAGQSQNAYATFENMWRAGIEPTDRCVALVLAAYEKENKLNQALDFLIGLEREKLI 375

Query: 182 VGKEASEVLVKWFRRLGVVEEVALVLSEYA 271
           +GKEASEVL +WF RLGVV+EV LVL EYA
Sbjct: 376 IGKEASEVLAEWFGRLGVVKEVELVLREYA 405


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