BLASTX nr result

ID: Cimicifuga21_contig00036134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036134
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002156904.1| PREDICTED: polyadenylate-binding protein 1-l...    61   1e-07
ref|XP_975975.1| PREDICTED: similar to poly A binding protein is...    59   4e-07
ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding pr...    58   9e-07
emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]    58   9e-07
ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding pr...    57   1e-06

>ref|XP_002156904.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Hydra
           magnipapillata]
          Length = 635

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/69 (43%), Positives = 44/69 (63%)
 Frame = +1

Query: 1   KGYGYVCFSSPDEAKKAIATIHMTMLKEKPLDVTIAQPKEGSLAKLLPRYSPQIEPIFSS 180
           KG+G+VCFSSPDEA KA+  ++  +L  KPL V +AQ KE   A+L  ++  ++ P+  +
Sbjct: 334 KGFGFVCFSSPDEATKAVTEMNGRILVTKPLYVALAQRKEERRAQLSTQFLQRVNPLRYN 393

Query: 181 LSGVYAQPG 207
            SG   Q G
Sbjct: 394 ASGTMPQAG 402


>ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
           castaneum] gi|270014772|gb|EFA11220.1| hypothetical
           protein TcasGA2_TC005185 [Tribolium castaneum]
          Length = 607

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/72 (41%), Positives = 43/72 (59%)
 Frame = +1

Query: 1   KGYGYVCFSSPDEAKKAIATIHMTMLKEKPLDVTIAQPKEGSLAKLLPRYSPQIEPIFSS 180
           KG+G+VCFSSP+EA KA+  ++  ++  KPL V +AQ KE   A L  +Y  ++  I   
Sbjct: 335 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEDRKAHLTSQYMQRMANIRMH 394

Query: 181 LSGVYAQPGNRS 216
             G + QPG  S
Sbjct: 395 QMGQFIQPGTSS 406


>ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
           vinifera] gi|297740018|emb|CBI30200.3| unnamed protein
           product [Vitis vinifera]
          Length = 634

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = +1

Query: 1   KGYGYVCFSSPDEAKKAIATIHMTMLKEKPLDVTIAQPKEGSLAKLLPRYSPQI 162
           KG+G+VCFS+PDEA KA+ T H  M   KPL V IAQ KE   A+L   Y+ ++
Sbjct: 334 KGFGFVCFSTPDEASKAVNTFHGYMFHRKPLYVAIAQRKEDRQAQLQLHYAQRM 387


>emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
          Length = 544

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = +1

Query: 1   KGYGYVCFSSPDEAKKAIATIHMTMLKEKPLDVTIAQPKEGSLAKLLPRYSPQI 162
           KG+G+VCFS+PDEA KA+ T H  M   KPL V IAQ KE   A+L   Y+ ++
Sbjct: 354 KGFGFVCFSTPDEASKAVNTFHGYMFHRKPLYVAIAQRKEDRQAQLQLHYAQRM 407


>ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 632

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = +1

Query: 1   KGYGYVCFSSPDEAKKAIATIHMTMLKEKPLDVTIAQPKEGSLAKLLPRYSPQI 162
           KG+G+VCFS+P+EA KA+ T H  M   KPL V +AQ KE   A+L  +Y+ Q+
Sbjct: 334 KGFGFVCFSTPEEANKAVNTFHGFMFHGKPLYVALAQRKEDRKAQLQLQYAQQV 387


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