BLASTX nr result

ID: Cimicifuga21_contig00036089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036089
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30066.3| unnamed protein product [Vitis vinifera]               91   7e-17
ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-li...    91   7e-17
emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]    91   7e-17
ref|XP_002308002.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_003589939.1| Peptide chain release factor [Medicago trunc...    77   1e-12

>emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/66 (68%), Positives = 54/66 (81%)
 Frame = +3

Query: 3   GVSDVKNINIDAIAKILRQETRRYIFQPYKLVQDVKTGIQLPDLNSILDGNIEPLIGAHI 182
           G+ +V  I  +AIA + +QETRRY+F P KLVQDVKT IQLPDLNS+LDGNIEPLIGA+I
Sbjct: 345 GIPEVGGIKREAIADMWKQETRRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANI 404

Query: 183 STRLAT 200
           S R A+
Sbjct: 405 SMRQAS 410


>ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 417

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/66 (68%), Positives = 54/66 (81%)
 Frame = +3

Query: 3   GVSDVKNINIDAIAKILRQETRRYIFQPYKLVQDVKTGIQLPDLNSILDGNIEPLIGAHI 182
           G+ +V  I  +AIA + +QETRRY+F P KLVQDVKT IQLPDLNS+LDGNIEPLIGA+I
Sbjct: 348 GIPEVGGIKREAIADMWKQETRRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANI 407

Query: 183 STRLAT 200
           S R A+
Sbjct: 408 SMRQAS 413


>emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]
          Length = 450

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/66 (68%), Positives = 54/66 (81%)
 Frame = +3

Query: 3   GVSDVKNINIDAIAKILRQETRRYIFQPYKLVQDVKTGIQLPDLNSILDGNIEPLIGAHI 182
           G+ +V  I  +AIA + +QETRRY+F P KLVQDVKT IQLPDLNS+LDGNIEPLIGA+I
Sbjct: 381 GIPEVGGIKREAIADMWKQETRRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANI 440

Query: 183 STRLAT 200
           S R A+
Sbjct: 441 SMRQAS 446


>ref|XP_002308002.1| predicted protein [Populus trichocarpa] gi|222853978|gb|EEE91525.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/62 (66%), Positives = 48/62 (77%)
 Frame = +3

Query: 6   VSDVKNINIDAIAKILRQETRRYIFQPYKLVQDVKTGIQLPDLNSILDGNIEPLIGAHIS 185
           V DV +I    I    ++ETRRY+ QPYKLVQDV+TGI+LPDLNSILDGNI  LIGAHI+
Sbjct: 310 VCDVSSIRRADIVDEWQKETRRYVSQPYKLVQDVRTGIELPDLNSILDGNINTLIGAHIN 369

Query: 186 TR 191
            R
Sbjct: 370 IR 371


>ref|XP_003589939.1| Peptide chain release factor [Medicago truncatula]
           gi|355478987|gb|AES60190.1| Peptide chain release factor
           [Medicago truncatula]
          Length = 538

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/63 (57%), Positives = 45/63 (71%)
 Frame = +3

Query: 3   GVSDVKNINIDAIAKILRQETRRYIFQPYKLVQDVKTGIQLPDLNSILDGNIEPLIGAHI 182
           GV  +  I  D I  +  ++TRRY+  PYKLV DVKT I++ DLNS+LDGNI PLI AHI
Sbjct: 475 GVGSINGIVKDKIVNLWEEKTRRYVSHPYKLVHDVKTDIEMSDLNSVLDGNIGPLIAAHI 534

Query: 183 STR 191
           +TR
Sbjct: 535 NTR 537


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