BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036072
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
emb|CBI36340.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago t...    57   1e-06

>ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|222867067|gb|EEF04198.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/71 (50%), Positives = 53/71 (74%)
 Frame = +1

Query: 49  APSLLKPNTTSSALSLEDTIKLLKISADTRNFKLGRTIHAHLVTATSNTHLNVIQTNSLI 228
           AP LL+PN  S +  L D IKLLK+SADT+N K+G+TIH+HL+  +  T  ++I+ NSLI
Sbjct: 15  APFLLRPNAVSPSSPL-DLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLI 73

Query: 229 HFYVKCSEISL 261
           +FY K +++S+
Sbjct: 74  NFYAKVNQVSI 84


>emb|CBI36340.3| unnamed protein product [Vitis vinifera]
          Length = 630

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/68 (51%), Positives = 45/68 (66%)
 Frame = +1

Query: 52  PSLLKPNTTSSALSLEDTIKLLKISADTRNFKLGRTIHAHLVTATSNTHLNVIQTNSLIH 231
           P LLK +T    L  E TI+LLK+SADT+N K G+ IHAHL+     T  N++Q NSLI+
Sbjct: 244 PFLLKSSTVGHPL--EHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLIN 301

Query: 232 FYVKCSEI 255
            Y KC +I
Sbjct: 302 LYAKCDQI 309


>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/68 (51%), Positives = 45/68 (66%)
 Frame = +1

Query: 52  PSLLKPNTTSSALSLEDTIKLLKISADTRNFKLGRTIHAHLVTATSNTHLNVIQTNSLIH 231
           P LLK +T    L  E TI+LLK+SADT+N K G+ IHAHL+     T  N++Q NSLI+
Sbjct: 13  PFLLKSSTVGHPL--EHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLIN 70

Query: 232 FYVKCSEI 255
            Y KC +I
Sbjct: 71  LYAKCDQI 78


>ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +1

Query: 97  EDTIKLLKISADTRNFKLGRTIHAHLVTATSN-THLNVIQTNSLIHFYVKCSEISL 261
           +D IKLLK++AD +N K GRTIHAHL     N     V Q NSLI+ YVKC E+S+
Sbjct: 20  QDPIKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSI 75


>ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355496269|gb|AES77472.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 700

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
 Frame = +1

Query: 91  SLEDTIKLLKISADTRNFKLGRTIHAH-LVTATSNTH-----LNVIQTNSLIHFYVKCSE 252
           SLE+ + LLK+SA+T+N   G++IH   L+   S+TH      N+IQ NSLI+ YVKCS+
Sbjct: 11  SLEELLHLLKLSANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSK 70

Query: 253 ISL 261
           + L
Sbjct: 71  LRL 73