BLASTX nr result

ID: Cimicifuga21_contig00036024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00036024
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529510.1| pentatricopeptide repeat-containing protein,...   156   1e-36
ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32
ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32
ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32

>ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531026|gb|EEF32879.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 804

 Score =  156 bits (395), Expect = 1e-36
 Identities = 71/96 (73%), Positives = 89/96 (92%)
 Frame = -2

Query: 288 TYTILICGLCKEGLVGEAQQIFKEMEKQECFPTVMTFNALMNGLCKAGKLEEAQILFYKM 109
           TYTILICG+C+ GLVG+AQQIF EMEK  C+P+V+TFNAL++G CKAG +E+AQ+LFYKM
Sbjct: 408 TYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM 467

Query: 108 EIGRNPFLFLRLSQGADQVLDSSSLQTLVERLCESG 1
           EIGRNP LFLRLSQGA++VLD++SLQT+VE+LC+SG
Sbjct: 468 EIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSG 503


>ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/96 (72%), Positives = 87/96 (90%)
 Frame = -2

Query: 288 TYTILICGLCKEGLVGEAQQIFKEMEKQECFPTVMTFNALMNGLCKAGKLEEAQILFYKM 109
           TYTILICG+C+ GL+ EA+QIF +ME   C P++MTFNAL++GLCKAG+LEEA+ LFYKM
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472

Query: 108 EIGRNPFLFLRLSQGADQVLDSSSLQTLVERLCESG 1
           EIG+NP LFLRLSQGAD+V+D++SLQT+VERLCESG
Sbjct: 473 EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESG 508


>ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/96 (68%), Positives = 82/96 (85%)
 Frame = -2

Query: 288 TYTILICGLCKEGLVGEAQQIFKEMEKQECFPTVMTFNALMNGLCKAGKLEEAQILFYKM 109
           TY+ILICG+CK GL+ +AQ IFKEMEK  C P+V+TFN+L+NGLCKA +LEEA++LFY+M
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469

Query: 108 EIGRNPFLFLRLSQGADQVLDSSSLQTLVERLCESG 1
           EI R P LFLRLSQG D+V D +SLQ ++ERLCESG
Sbjct: 470 EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESG 505


>ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/96 (68%), Positives = 82/96 (85%)
 Frame = -2

Query: 288 TYTILICGLCKEGLVGEAQQIFKEMEKQECFPTVMTFNALMNGLCKAGKLEEAQILFYKM 109
           TY+ILICG+CK GL+ +AQ IFKEMEK  C P+V+TFN+L+NGLCKA +LEEA++LFY+M
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469

Query: 108 EIGRNPFLFLRLSQGADQVLDSSSLQTLVERLCESG 1
           EI R P LFLRLSQG D+V D +SLQ ++ERLCESG
Sbjct: 470 EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESG 505


>ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Glycine max]
          Length = 555

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/96 (67%), Positives = 82/96 (85%)
 Frame = -2

Query: 288 TYTILICGLCKEGLVGEAQQIFKEMEKQECFPTVMTFNALMNGLCKAGKLEEAQILFYKM 109
           T+TI+IC LCK G+  +AQ+IF +MEK  CFP+++TFNALM+GLCKAGKLEEA +L YKM
Sbjct: 190 THTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHLLLYKM 249

Query: 108 EIGRNPFLFLRLSQGADQVLDSSSLQTLVERLCESG 1
           EIGR+P LF RLSQG+DQVLDS +LQ  VE++CE+G
Sbjct: 250 EIGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAG 285


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