BLASTX nr result
ID: Cimicifuga21_contig00036024
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00036024 (289 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529510.1| pentatricopeptide repeat-containing protein,... 156 1e-36 ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi... 151 6e-35 ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containi... 142 2e-32 ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containi... 142 2e-32 ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containi... 140 8e-32 >ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 804 Score = 156 bits (395), Expect = 1e-36 Identities = 71/96 (73%), Positives = 89/96 (92%) Frame = -2 Query: 288 TYTILICGLCKEGLVGEAQQIFKEMEKQECFPTVMTFNALMNGLCKAGKLEEAQILFYKM 109 TYTILICG+C+ GLVG+AQQIF EMEK C+P+V+TFNAL++G CKAG +E+AQ+LFYKM Sbjct: 408 TYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM 467 Query: 108 EIGRNPFLFLRLSQGADQVLDSSSLQTLVERLCESG 1 EIGRNP LFLRLSQGA++VLD++SLQT+VE+LC+SG Sbjct: 468 EIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSG 503 >ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like [Vitis vinifera] Length = 798 Score = 151 bits (381), Expect = 6e-35 Identities = 70/96 (72%), Positives = 87/96 (90%) Frame = -2 Query: 288 TYTILICGLCKEGLVGEAQQIFKEMEKQECFPTVMTFNALMNGLCKAGKLEEAQILFYKM 109 TYTILICG+C+ GL+ EA+QIF +ME C P++MTFNAL++GLCKAG+LEEA+ LFYKM Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472 Query: 108 EIGRNPFLFLRLSQGADQVLDSSSLQTLVERLCESG 1 EIG+NP LFLRLSQGAD+V+D++SLQT+VERLCESG Sbjct: 473 EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESG 508 >ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like [Cucumis sativus] Length = 950 Score = 142 bits (359), Expect = 2e-32 Identities = 66/96 (68%), Positives = 82/96 (85%) Frame = -2 Query: 288 TYTILICGLCKEGLVGEAQQIFKEMEKQECFPTVMTFNALMNGLCKAGKLEEAQILFYKM 109 TY+ILICG+CK GL+ +AQ IFKEMEK C P+V+TFN+L+NGLCKA +LEEA++LFY+M Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469 Query: 108 EIGRNPFLFLRLSQGADQVLDSSSLQTLVERLCESG 1 EI R P LFLRLSQG D+V D +SLQ ++ERLCESG Sbjct: 470 EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESG 505 >ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like [Cucumis sativus] Length = 783 Score = 142 bits (359), Expect = 2e-32 Identities = 66/96 (68%), Positives = 82/96 (85%) Frame = -2 Query: 288 TYTILICGLCKEGLVGEAQQIFKEMEKQECFPTVMTFNALMNGLCKAGKLEEAQILFYKM 109 TY+ILICG+CK GL+ +AQ IFKEMEK C P+V+TFN+L+NGLCKA +LEEA++LFY+M Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469 Query: 108 EIGRNPFLFLRLSQGADQVLDSSSLQTLVERLCESG 1 EI R P LFLRLSQG D+V D +SLQ ++ERLCESG Sbjct: 470 EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESG 505 >ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like [Glycine max] Length = 555 Score = 140 bits (354), Expect = 8e-32 Identities = 65/96 (67%), Positives = 82/96 (85%) Frame = -2 Query: 288 TYTILICGLCKEGLVGEAQQIFKEMEKQECFPTVMTFNALMNGLCKAGKLEEAQILFYKM 109 T+TI+IC LCK G+ +AQ+IF +MEK CFP+++TFNALM+GLCKAGKLEEA +L YKM Sbjct: 190 THTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHLLLYKM 249 Query: 108 EIGRNPFLFLRLSQGADQVLDSSSLQTLVERLCESG 1 EIGR+P LF RLSQG+DQVLDS +LQ VE++CE+G Sbjct: 250 EIGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAG 285