BLASTX nr result

ID: Cimicifuga21_contig00035962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035962
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530948.1| catalytic, putative [Ricinus communis] gi|22...   314   9e-84
ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   308   5e-82
ref|XP_002268382.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   306   1e-81
emb|CAN68950.1| hypothetical protein VITISV_039537 [Vitis vinifera]   305   5e-81
ref|XP_002875730.1| exostosin family protein [Arabidopsis lyrata...   297   9e-79

>ref|XP_002530948.1| catalytic, putative [Ricinus communis] gi|223529463|gb|EEF31420.1|
           catalytic, putative [Ricinus communis]
          Length = 512

 Score =  314 bits (804), Expect = 9e-84
 Identities = 149/203 (73%), Positives = 173/203 (85%), Gaps = 4/203 (1%)
 Frame = +2

Query: 14  VKC----DSSKVPLKVFMYDMPPEFHFGLLDWKAEGNSVWPDIQTKIPDYPGGLNLQHSI 181
           VKC    ++ K PLKVFMYD+PPEFHF LLDWKA+G+SVWPD++TKIP YPGGLNLQHSI
Sbjct: 97  VKCNTPLENRKEPLKVFMYDLPPEFHFELLDWKAQGDSVWPDLRTKIPGYPGGLNLQHSI 156

Query: 182 EYWLTLDLLYSRFRDPNGVYSAIRVFNSSEADIVFVPFFSSLSYNRYSKLKKPQKRSPNR 361
           EYWLTLDLL S         SAIRV NSSEAD++FVPFFSSLSYNRYSK+   QKRS N+
Sbjct: 157 EYWLTLDLLASEISGIPRAGSAIRVRNSSEADVIFVPFFSSLSYNRYSKVNPHQKRSKNK 216

Query: 362 VLQLKLIRYLTSQEEWKRSGGRDHIVMAHHPNSMLDARTMLWPAMFILSDFGRYPPNVAN 541
           +LQ KL+RY+TSQ EWKRS G+DHI++AHHPNSMLDAR  LWPA+FIL+DFGRYPPN+AN
Sbjct: 217 LLQEKLVRYVTSQMEWKRSQGQDHIILAHHPNSMLDARMKLWPALFILADFGRYPPNIAN 276

Query: 542 VDKDVIAPYKHVIRTFFNDSSGF 610
           VDKD+IAPYKHVIR++ +DSS F
Sbjct: 277 VDKDLIAPYKHVIRSYADDSSTF 299


>ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like
           [Glycine max]
          Length = 509

 Score =  308 bits (789), Expect = 5e-82
 Identities = 142/199 (71%), Positives = 168/199 (84%), Gaps = 1/199 (0%)
 Frame = +2

Query: 17  KCD-SSKVPLKVFMYDMPPEFHFGLLDWKAEGNSVWPDIQTKIPDYPGGLNLQHSIEYWL 193
           KC+ + +V LKVFMYD+PPEFHFGLLDWK  GNSVWPD++T IP YPGGLNLQHSIE+WL
Sbjct: 110 KCNRNDEVVLKVFMYDLPPEFHFGLLDWKPSGNSVWPDVRTNIPGYPGGLNLQHSIEFWL 169

Query: 194 TLDLLYSRFRDPNGVYSAIRVFNSSEADIVFVPFFSSLSYNRYSKLKKPQKRSPNRVLQL 373
           TLD+L S F   +   + IRV NSSEADI+FVPFFSSLSYNRYSK K   K+S N++LQ 
Sbjct: 170 TLDILASEFPQASKARTVIRVQNSSEADIIFVPFFSSLSYNRYSKSKPHVKKSKNKILQE 229

Query: 374 KLIRYLTSQEEWKRSGGRDHIVMAHHPNSMLDARTMLWPAMFILSDFGRYPPNVANVDKD 553
           KL+ YL +QEEWKRSGG+DH+++AHHPNSMLDAR  LWPA FILSDFGRYPPN+ANV+KD
Sbjct: 230 KLVTYLMAQEEWKRSGGKDHLILAHHPNSMLDARMKLWPATFILSDFGRYPPNIANVEKD 289

Query: 554 VIAPYKHVIRTFFNDSSGF 610
           VIAPYKH+I ++ ND+S F
Sbjct: 290 VIAPYKHLISSYVNDNSNF 308


>ref|XP_002268382.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase [Vitis
           vinifera]
          Length = 488

 Score =  306 bits (785), Expect = 1e-81
 Identities = 144/202 (71%), Positives = 165/202 (81%)
 Frame = +2

Query: 5   KGMVKCDSSKVPLKVFMYDMPPEFHFGLLDWKAEGNSVWPDIQTKIPDYPGGLNLQHSIE 184
           K  VKC S+   LKVFMYD+P EFHFGLLDW   G SVWPDI+TK P YPGGLNLQHSIE
Sbjct: 86  KNSVKCGSNYPVLKVFMYDLPAEFHFGLLDWAPAGESVWPDIRTKFPLYPGGLNLQHSIE 145

Query: 185 YWLTLDLLYSRFRDPNGVYSAIRVFNSSEADIVFVPFFSSLSYNRYSKLKKPQKRSPNRV 364
           YWLTLDLL S F +     +AIRV NSSEAD++FVPFFSSLSYN + K K  QK++ N +
Sbjct: 146 YWLTLDLLSSEFPENQNARAAIRVHNSSEADVIFVPFFSSLSYNHFGKFKGRQKKNENNL 205

Query: 365 LQLKLIRYLTSQEEWKRSGGRDHIVMAHHPNSMLDARTMLWPAMFILSDFGRYPPNVANV 544
           LQ KL+++LT+QEEW RS GRDHI+MAHHPNSMLDAR  LWPA+FILSDFGRYPPN+ANV
Sbjct: 206 LQDKLVKFLTAQEEWIRSEGRDHIIMAHHPNSMLDARMKLWPAIFILSDFGRYPPNIANV 265

Query: 545 DKDVIAPYKHVIRTFFNDSSGF 610
            KDVIAPYKHVI++F ND+S F
Sbjct: 266 GKDVIAPYKHVIKSFINDTSDF 287


>emb|CAN68950.1| hypothetical protein VITISV_039537 [Vitis vinifera]
          Length = 488

 Score =  305 bits (780), Expect = 5e-81
 Identities = 143/202 (70%), Positives = 164/202 (81%)
 Frame = +2

Query: 5   KGMVKCDSSKVPLKVFMYDMPPEFHFGLLDWKAEGNSVWPDIQTKIPDYPGGLNLQHSIE 184
           K  VKC S+   LKVFMYD+P EFHFGLLDW   G SVWPDI+TK P YPGGLNLQHSIE
Sbjct: 86  KNSVKCGSNYPVLKVFMYDLPAEFHFGLLDWAPAGESVWPDIRTKFPLYPGGLNLQHSIE 145

Query: 185 YWLTLDLLYSRFRDPNGVYSAIRVFNSSEADIVFVPFFSSLSYNRYSKLKKPQKRSPNRV 364
           YWLTLDLL S F +      AIRV NSSEAD++FVPFFSSLSYN + K K  QK++ N +
Sbjct: 146 YWLTLDLLSSEFPENQNARXAIRVHNSSEADVIFVPFFSSLSYNHFGKFKGRQKKNENNL 205

Query: 365 LQLKLIRYLTSQEEWKRSGGRDHIVMAHHPNSMLDARTMLWPAMFILSDFGRYPPNVANV 544
           LQ KL+++LT+QEEW RS GRDHI+MAHHPNSMLDAR  LWPA+FILSDFGRYPPN+ANV
Sbjct: 206 LQDKLVKFLTAQEEWIRSEGRDHIIMAHHPNSMLDARMKLWPAIFILSDFGRYPPNIANV 265

Query: 545 DKDVIAPYKHVIRTFFNDSSGF 610
            KD+IAPYKHVI++F ND+S F
Sbjct: 266 GKDLIAPYKHVIKSFINDTSDF 287


>ref|XP_002875730.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321568|gb|EFH51989.1| exostosin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 479

 Score =  297 bits (761), Expect = 9e-79
 Identities = 141/196 (71%), Positives = 163/196 (83%), Gaps = 5/196 (2%)
 Frame = +2

Query: 38  PLKVFMYDMPPEFHFGLLDWKAEGN-----SVWPDIQTKIPDYPGGLNLQHSIEYWLTLD 202
           PLKV+MY+M PEFHFGLLDWK +GN     SVWPDIQ  IP YPGGLNLQHSIEYWLTLD
Sbjct: 82  PLKVYMYNMDPEFHFGLLDWKPDGNKKGSDSVWPDIQKYIPPYPGGLNLQHSIEYWLTLD 141

Query: 203 LLYSRFRDPNGVYSAIRVFNSSEADIVFVPFFSSLSYNRYSKLKKPQKRSPNRVLQLKLI 382
           LL S + +     +A RV+NSSEAD++FVPFFSSLSYNR+SK+   QK S N+ LQ KL+
Sbjct: 142 LLASEYENAPRAVAAKRVYNSSEADVIFVPFFSSLSYNRFSKVNPHQKTSRNKDLQGKLV 201

Query: 383 RYLTSQEEWKRSGGRDHIVMAHHPNSMLDARTMLWPAMFILSDFGRYPPNVANVDKDVIA 562
            +LT QEEWKRSGGRDH+V+AHHPNSMLDAR  L+PAMFILSDFGRYPP VANV+KD+IA
Sbjct: 202 TFLTGQEEWKRSGGRDHVVLAHHPNSMLDARNKLFPAMFILSDFGRYPPTVANVEKDIIA 261

Query: 563 PYKHVIRTFFNDSSGF 610
           PYKHVI+ + ND+SGF
Sbjct: 262 PYKHVIKAYENDTSGF 277


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