BLASTX nr result

ID: Cimicifuga21_contig00035953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035953
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25377.3| unnamed protein product [Vitis vinifera]              138   4e-31
ref|XP_002274607.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA ...   138   4e-31
ref|XP_002523049.1| N(2),N(2)-dimethylguanosine tRNA methyltrans...   130   1e-28
ref|XP_002319867.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_003528018.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA ...   117   1e-24

>emb|CBI25377.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/86 (73%), Positives = 74/86 (86%)
 Frame = -1

Query: 260 ILSNFSENVRVEEGERKWVVTHSDANRVMAECYLQRDFFDLIDIDSFGSNSTFFRSAYDA 81
           IL N S+ +     ER+WVVTH+DANRVM ECYL+RDF+DLID+DSFGS S+F RSAY+A
Sbjct: 33  ILENLSQGLGGSGEERRWVVTHTDANRVMTECYLRRDFYDLIDVDSFGSESSFLRSAYNA 92

Query: 80  LKLDGLLYVTSTDGFSSGGHRPHHSL 3
           LKLDGL YVTSTDG++SGGHRPHHSL
Sbjct: 93  LKLDGLFYVTSTDGYTSGGHRPHHSL 118


>ref|XP_002274607.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
           [Vitis vinifera] gi|147780177|emb|CAN75521.1|
           hypothetical protein VITISV_043594 [Vitis vinifera]
          Length = 424

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/86 (73%), Positives = 74/86 (86%)
 Frame = -1

Query: 260 ILSNFSENVRVEEGERKWVVTHSDANRVMAECYLQRDFFDLIDIDSFGSNSTFFRSAYDA 81
           IL N S+ +     ER+WVVTH+DANRVM ECYL+RDF+DLID+DSFGS S+F RSAY+A
Sbjct: 119 ILENLSQGLGGSGEERRWVVTHTDANRVMTECYLRRDFYDLIDVDSFGSESSFLRSAYNA 178

Query: 80  LKLDGLLYVTSTDGFSSGGHRPHHSL 3
           LKLDGL YVTSTDG++SGGHRPHHSL
Sbjct: 179 LKLDGLFYVTSTDGYTSGGHRPHHSL 204


>ref|XP_002523049.1| N(2),N(2)-dimethylguanosine tRNA methyltransferase, putative
           [Ricinus communis] gi|223537732|gb|EEF39353.1|
           N(2),N(2)-dimethylguanosine tRNA methyltransferase,
           putative [Ricinus communis]
          Length = 422

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/86 (74%), Positives = 70/86 (81%)
 Frame = -1

Query: 260 ILSNFSENVRVEEGERKWVVTHSDANRVMAECYLQRDFFDLIDIDSFGSNSTFFRSAYDA 81
           I+ N  +  R    ERKWVVTH DANRV+ ECYLQRDFFDLIDIDSFGS+S F RSA  A
Sbjct: 114 IVGNLKQVGRGFGDERKWVVTHFDANRVLTECYLQRDFFDLIDIDSFGSDSLFLRSAMSA 173

Query: 80  LKLDGLLYVTSTDGFSSGGHRPHHSL 3
           LKLDGLLY+TSTDG+SSGGHRPH SL
Sbjct: 174 LKLDGLLYLTSTDGYSSGGHRPHCSL 199


>ref|XP_002319867.1| predicted protein [Populus trichocarpa] gi|222858243|gb|EEE95790.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/87 (70%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
 Frame = -1

Query: 260 ILSNFSENVRVEEGERKWVVTHSDANRVMAECYLQRDFFDLIDIDSFGSN-STFFRSAYD 84
           IL N     R    ERKWVVTH DANRV++ECYLQ+DFFDLIDIDSFGS+ S F RSA +
Sbjct: 117 ILENLKRVDRGFGDERKWVVTHLDANRVLSECYLQKDFFDLIDIDSFGSDISLFLRSAMN 176

Query: 83  ALKLDGLLYVTSTDGFSSGGHRPHHSL 3
            L  DGLLYVTSTDG SSGGH P HSL
Sbjct: 177 TLSFDGLLYVTSTDGHSSGGHHPDHSL 203


>ref|XP_003528018.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA methyltransferase
           Trm1-like [Glycine max]
          Length = 432

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/74 (74%), Positives = 62/74 (83%)
 Frame = -1

Query: 224 EGERKWVVTHSDANRVMAECYLQRDFFDLIDIDSFGSNSTFFRSAYDALKLDGLLYVTST 45
           E E +WVVTH +ANRVM + YLQ+ FFD ID+DSFGS+S+F RSA   LKL GLLYVTST
Sbjct: 134 EEEGRWVVTHLEANRVMMDYYLQKSFFDFIDVDSFGSDSSFLRSAICTLKLGGLLYVTST 193

Query: 44  DGFSSGGHRPHHSL 3
           DGFSSGGHRPHHSL
Sbjct: 194 DGFSSGGHRPHHSL 207


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