BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035940
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002878387.1| pentatricopeptide repeat-containing protein ...   107   8e-22

>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
           gi|297745328|emb|CBI40408.3| unnamed protein product
           [Vitis vinifera]
          Length = 765

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/111 (58%), Positives = 88/111 (79%)
 Frame = +3

Query: 3   LVELVSKFGKHCVFPNAVVLTKLITKLGKSGHTNQAWDLLHVVMKMDCSVEASSVNALLV 182
           +V LVSKF +H VFPN++ LT+LI++L +SG T++AWD+LH +MK+   +EA+S NALL 
Sbjct: 254 IVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLT 313

Query: 183 GLGREDNFQKMNLLLSEMKETGIEPDGITFGILINHLCRSRRVDEALRVLD 335
            LGR   F++MN LL+EMKE  I+P+ +TFGILINHLC+ RRVDEAL V +
Sbjct: 314 ALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFE 364



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/95 (33%), Positives = 51/95 (53%)
 Frame = +3

Query: 48  NAVVLTKLITKLGKSGHTNQAWDLLHVVMKMDCSVEASSVNALLVGLGREDNFQKMNLLL 227
           NAV  T LI       +  +A +L   +++  CS +A     L+ GL +     + + +L
Sbjct: 485 NAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVL 544

Query: 228 SEMKETGIEPDGITFGILINHLCRSRRVDEALRVL 332
           S+MKE G  PD ++F +LIN  CR  ++DEA  +L
Sbjct: 545 SKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEML 579


>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
           gi|449475521|ref|XP_004154479.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/108 (54%), Positives = 82/108 (75%)
 Frame = +3

Query: 12  LVSKFGKHCVFPNAVVLTKLITKLGKSGHTNQAWDLLHVVMKMDCSVEASSVNALLVGLG 191
           LVSKFGKH +FP+ + LT+LI+KL +SG+TN AW++L  +M ++   +A+  NALL GLG
Sbjct: 104 LVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLG 163

Query: 192 REDNFQKMNLLLSEMKETGIEPDGITFGILINHLCRSRRVDEALRVLD 335
           +   F KMNLL+ +MK+  I+P  ITFGILINHLC+ RR+D+AL V +
Sbjct: 164 KAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFE 211


>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/111 (48%), Positives = 79/111 (71%)
 Frame = +3

Query: 3   LVELVSKFGKHCVFPNAVVLTKLITKLGKSGHTNQAWDLLHVVMKMDCSVEASSVNALLV 182
           +V LV+K G+  VFP+   LT+L+ KL        AW++LH VM++  +V+A+S NALL 
Sbjct: 230 VVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLT 289

Query: 183 GLGREDNFQKMNLLLSEMKETGIEPDGITFGILINHLCRSRRVDEALRVLD 335
            LGR  + ++MN LL+EM++  I P  +TFGIL+NHLC++RR+DEAL+V D
Sbjct: 290 WLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFD 340


>ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/111 (46%), Positives = 80/111 (72%)
 Frame = +3

Query: 3   LVELVSKFGKHCVFPNAVVLTKLITKLGKSGHTNQAWDLLHVVMKMDCSVEASSVNALLV 182
           +V LV KFG+H V  ++  + +LIT+L ++  TN+ WDL   ++K+   +E+++ N+LL 
Sbjct: 254 IVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLT 313

Query: 183 GLGREDNFQKMNLLLSEMKETGIEPDGITFGILINHLCRSRRVDEALRVLD 335
           GL RE NF +MN L+ +M E  I+P+ +TFGILINH+C+ RRVD+AL VL+
Sbjct: 314 GLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLE 364


>ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324225|gb|EFH54646.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 766

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/111 (50%), Positives = 74/111 (66%)
 Frame = +3

Query: 3   LVELVSKFGKHCVFPNAVVLTKLITKLGKSGHTNQAWDLLHVVMKMDCSVEASSVNALLV 182
           ++ L+S+F  H V PN+V LT+ I+ L K+  TN AWD+L  +MK    +EA   NALL 
Sbjct: 243 IIGLISRFSSHGVSPNSVWLTRFISSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALLS 302

Query: 183 GLGREDNFQKMNLLLSEMKETGIEPDGITFGILINHLCRSRRVDEALRVLD 335
            LGR  N  +MN L+ +M E  I PD +T GILIN LC+SRRVDEAL+V +
Sbjct: 303 CLGRNMNIGRMNALVLKMDEMKIRPDVVTLGILINTLCKSRRVDEALQVFE 353