BLASTX nr result

ID: Cimicifuga21_contig00035926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035926
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187366.2| sec24-like transport protein [Arabidopsis thali...   201   5e-50
ref|XP_002884626.1| hypothetical protein ARALYDRAFT_478029 [Arab...   201   5e-50
gb|AAF20236.1|AC012395_23 putative Sec24-like COPII protein [Ara...   201   5e-50
ref|XP_004163368.1| PREDICTED: protein transport protein Sec24-l...   199   1e-49
ref|XP_004135758.1| PREDICTED: protein transport protein Sec24-l...   199   1e-49

>ref|NP_187366.2| sec24-like transport protein [Arabidopsis thaliana]
           gi|78099801|sp|Q9SFU0.2|SC24A_ARATH RecName:
           Full=Protein transport protein Sec24-like At3g07100
           gi|22531076|gb|AAM97042.1| putative Sec24-like COPII
           protein [Arabidopsis thaliana]
           gi|23197930|gb|AAN15492.1| putative Sec24-like COPII
           protein [Arabidopsis thaliana]
           gi|332640977|gb|AEE74498.1| sec24-like transport protein
           [Arabidopsis thaliana]
          Length = 1038

 Score =  201 bits (511), Expect = 5e-50
 Identities = 92/110 (83%), Positives = 103/110 (93%)
 Frame = +1

Query: 1   YKQMAADLTSFQIGVNIYAFSDKYIDIASLGTLAKYTGGQVYYYPNFDGNVHGEKLKYEL 180
           YKQMAAD T FQIG+N+YAFSDKY DIASLGTLAKYTGGQVYYYP F  +VHG+KL++EL
Sbjct: 617 YKQMAADCTKFQIGINVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSVHGDKLRHEL 676

Query: 181 ARDLTRETAWEAVMRIRCGKGLRFSTYHGNFLLKSMDLLALPAVDCDKAF 330
           ARDLTRETAWEAVMRIRCGKG+RFS+YHGNF+L+S DLLALPAVDCDKA+
Sbjct: 677 ARDLTRETAWEAVMRIRCGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAY 726


>ref|XP_002884626.1| hypothetical protein ARALYDRAFT_478029 [Arabidopsis lyrata subsp.
           lyrata] gi|297330466|gb|EFH60885.1| hypothetical protein
           ARALYDRAFT_478029 [Arabidopsis lyrata subsp. lyrata]
          Length = 1036

 Score =  201 bits (511), Expect = 5e-50
 Identities = 92/110 (83%), Positives = 103/110 (93%)
 Frame = +1

Query: 1   YKQMAADLTSFQIGVNIYAFSDKYIDIASLGTLAKYTGGQVYYYPNFDGNVHGEKLKYEL 180
           YKQMAAD T FQIG+N+YAFSDKY DIASLGTLAKYTGGQVYYYP F  +VHG+KL++EL
Sbjct: 615 YKQMAADCTKFQIGINVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSVHGDKLRHEL 674

Query: 181 ARDLTRETAWEAVMRIRCGKGLRFSTYHGNFLLKSMDLLALPAVDCDKAF 330
           ARDLTRETAWEAVMRIRCGKG+RFS+YHGNF+L+S DLLALPAVDCDKA+
Sbjct: 675 ARDLTRETAWEAVMRIRCGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAY 724


>gb|AAF20236.1|AC012395_23 putative Sec24-like COPII protein [Arabidopsis thaliana]
          Length = 1054

 Score =  201 bits (511), Expect = 5e-50
 Identities = 92/110 (83%), Positives = 103/110 (93%)
 Frame = +1

Query: 1   YKQMAADLTSFQIGVNIYAFSDKYIDIASLGTLAKYTGGQVYYYPNFDGNVHGEKLKYEL 180
           YKQMAAD T FQIG+N+YAFSDKY DIASLGTLAKYTGGQVYYYP F  +VHG+KL++EL
Sbjct: 615 YKQMAADCTKFQIGINVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSVHGDKLRHEL 674

Query: 181 ARDLTRETAWEAVMRIRCGKGLRFSTYHGNFLLKSMDLLALPAVDCDKAF 330
           ARDLTRETAWEAVMRIRCGKG+RFS+YHGNF+L+S DLLALPAVDCDKA+
Sbjct: 675 ARDLTRETAWEAVMRIRCGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAY 724


>ref|XP_004163368.1| PREDICTED: protein transport protein Sec24-like At3g07100-like
           [Cucumis sativus]
          Length = 1031

 Score =  199 bits (507), Expect = 1e-49
 Identities = 91/110 (82%), Positives = 103/110 (93%)
 Frame = +1

Query: 1   YKQMAADLTSFQIGVNIYAFSDKYIDIASLGTLAKYTGGQVYYYPNFDGNVHGEKLKYEL 180
           YKQMAA+ T FQIGVN+YAFSDKY DIASLGTLAKYTGGQVYYYP F  ++HGEKL++EL
Sbjct: 608 YKQMAAEFTKFQIGVNVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSIHGEKLRHEL 667

Query: 181 ARDLTRETAWEAVMRIRCGKGLRFSTYHGNFLLKSMDLLALPAVDCDKAF 330
           ARDLTRETAWEAVMRIRCGKG+RF+++HGNF+L+S DLLALPAVDCDKAF
Sbjct: 668 ARDLTRETAWEAVMRIRCGKGIRFTSFHGNFMLRSTDLLALPAVDCDKAF 717


>ref|XP_004135758.1| PREDICTED: protein transport protein Sec24-like At3g07100-like
           [Cucumis sativus]
          Length = 1031

 Score =  199 bits (507), Expect = 1e-49
 Identities = 91/110 (82%), Positives = 103/110 (93%)
 Frame = +1

Query: 1   YKQMAADLTSFQIGVNIYAFSDKYIDIASLGTLAKYTGGQVYYYPNFDGNVHGEKLKYEL 180
           YKQMAA+ T FQIGVN+YAFSDKY DIASLGTLAKYTGGQVYYYP F  ++HGEKL++EL
Sbjct: 608 YKQMAAEFTKFQIGVNVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSIHGEKLRHEL 667

Query: 181 ARDLTRETAWEAVMRIRCGKGLRFSTYHGNFLLKSMDLLALPAVDCDKAF 330
           ARDLTRETAWEAVMRIRCGKG+RF+++HGNF+L+S DLLALPAVDCDKAF
Sbjct: 668 ARDLTRETAWEAVMRIRCGKGIRFTSFHGNFMLRSTDLLALPAVDCDKAF 717


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