BLASTX nr result

ID: Cimicifuga21_contig00035893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035893
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265735.1| PREDICTED: uncharacterized protein LOC100254...   172   3e-41
ref|XP_002519298.1| conserved hypothetical protein [Ricinus comm...   162   2e-38
ref|XP_002314989.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
gb|ABK94164.1| unknown [Populus trichocarpa]                          161   6e-38
ref|XP_002312300.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37

>ref|XP_002265735.1| PREDICTED: uncharacterized protein LOC100254448 [Vitis vinifera]
           gi|297736795|emb|CBI25996.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score =  172 bits (435), Expect = 3e-41
 Identities = 72/89 (80%), Positives = 84/89 (94%)
 Frame = +2

Query: 38  PPCCFTSYNTVKYMSMNILDCSHYTAVYNTDGLKGIGPLDWAYGIKLSYSIPNSGCERCQ 217
           PPCCFT Y+TVKYMSMNILDCSHYT+VY+TDGLKGIGPLDW+YGIKLSY+IP++GCERC 
Sbjct: 171 PPCCFTGYDTVKYMSMNILDCSHYTSVYDTDGLKGIGPLDWSYGIKLSYAIPDTGCERCT 230

Query: 218 RSGGTCGYDTETEMVVCLCTSSNNSTREC 304
           RSGGTCG+DT+TE  +C+C+SS NSTREC
Sbjct: 231 RSGGTCGFDTQTEGTLCICSSSTNSTREC 259


>ref|XP_002519298.1| conserved hypothetical protein [Ricinus communis]
           gi|223541613|gb|EEF43162.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 294

 Score =  162 bits (411), Expect = 2e-38
 Identities = 68/89 (76%), Positives = 80/89 (89%)
 Frame = +2

Query: 38  PPCCFTSYNTVKYMSMNILDCSHYTAVYNTDGLKGIGPLDWAYGIKLSYSIPNSGCERCQ 217
           PPCCFT Y+TV+YMSMNILDC+HYT V NTD LKGIGPLDW YGIKLSYS+P++GCERC 
Sbjct: 173 PPCCFTGYDTVRYMSMNILDCTHYTTVVNTDNLKGIGPLDWVYGIKLSYSMPDTGCERCS 232

Query: 218 RSGGTCGYDTETEMVVCLCTSSNNSTREC 304
           +SGGTCG+DTET  ++CLC+SS N+TREC
Sbjct: 233 QSGGTCGFDTETGGMLCLCSSSTNATREC 261


>ref|XP_002314989.1| predicted protein [Populus trichocarpa] gi|222864029|gb|EEF01160.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  161 bits (407), Expect = 6e-38
 Identities = 66/89 (74%), Positives = 78/89 (87%)
 Frame = +2

Query: 38  PPCCFTSYNTVKYMSMNILDCSHYTAVYNTDGLKGIGPLDWAYGIKLSYSIPNSGCERCQ 217
           PPCCFT Y+TVK+M MNILDC+HYT V NTD L+GIGPLDW YGIKLS+++P +GCERC 
Sbjct: 114 PPCCFTGYDTVKFMRMNILDCTHYTTVINTDNLRGIGPLDWVYGIKLSFTVPETGCERCS 173

Query: 218 RSGGTCGYDTETEMVVCLCTSSNNSTREC 304
           +SGGTCGYDTETE++ CLC+SS N TREC
Sbjct: 174 QSGGTCGYDTETEVMTCLCSSSTNYTREC 202


>gb|ABK94164.1| unknown [Populus trichocarpa]
          Length = 280

 Score =  161 bits (407), Expect = 6e-38
 Identities = 66/89 (74%), Positives = 78/89 (87%)
 Frame = +2

Query: 38  PPCCFTSYNTVKYMSMNILDCSHYTAVYNTDGLKGIGPLDWAYGIKLSYSIPNSGCERCQ 217
           PPCCFT Y+TVK+M MNILDC+HYT V NTD L+GIGPLDW YGIKLS+++P +GCERC 
Sbjct: 171 PPCCFTGYDTVKFMRMNILDCTHYTTVINTDNLRGIGPLDWVYGIKLSFTVPETGCERCS 230

Query: 218 RSGGTCGYDTETEMVVCLCTSSNNSTREC 304
           +SGGTCGYDTETE++ CLC+SS N TREC
Sbjct: 231 QSGGTCGYDTETEVMTCLCSSSTNYTREC 259


>ref|XP_002312300.1| predicted protein [Populus trichocarpa] gi|222852120|gb|EEE89667.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  158 bits (399), Expect = 5e-37
 Identities = 67/89 (75%), Positives = 77/89 (86%)
 Frame = +2

Query: 38  PPCCFTSYNTVKYMSMNILDCSHYTAVYNTDGLKGIGPLDWAYGIKLSYSIPNSGCERCQ 217
           PPCCFT Y+TVK+MSMNILDC+HYT V NTD L GI P DW YGIKLSYS+P +GCERC 
Sbjct: 168 PPCCFTGYDTVKFMSMNILDCTHYTTVINTDSLMGIVPSDWVYGIKLSYSVPETGCERCS 227

Query: 218 RSGGTCGYDTETEMVVCLCTSSNNSTREC 304
           +SGGTCGYDTETE ++CLC+SS+N TREC
Sbjct: 228 QSGGTCGYDTETEGMMCLCSSSSNYTREC 256


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