BLASTX nr result

ID: Cimicifuga21_contig00035886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035886
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm...   141   6e-32
ref|XP_002885164.1| hypothetical protein ARALYDRAFT_897993 [Arab...   135   5e-30
ref|NP_188295.2| condensin-2 complex subunit H2 [Arabidopsis tha...   134   8e-30
ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
emb|CBI22967.3| unnamed protein product [Vitis vinifera]              126   2e-27

>ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis]
           gi|223544047|gb|EEF45573.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 667

 Score =  141 bits (355), Expect = 6e-32
 Identities = 74/135 (54%), Positives = 94/135 (69%)
 Frame = +1

Query: 1   EETSGRPEGEDSNAVVDDENEPFLGLDDVPLEAKNSLDDGHNKGDTSNLFVKPPANFVVL 180
           E TS +PE   SNA  D+E++ F   DDVP+EA+NSLD   +K D+   FVKPPAN +VL
Sbjct: 99  EGTSFQPEQNGSNAASDEESDQFWVSDDVPVEARNSLDASTSKDDSLYHFVKPPANLIVL 158

Query: 181 EGDCFDSIGDVGELESYLLATHDLYRDFILLDPCDAGAIDKYLEEYKTCRGSNIAHRGSS 360
           EGDC ++ GD GEL+SYLLAT+DLYRDFILLDPCDA A++ +    +T +G N   +GSS
Sbjct: 159 EGDCLNTTGDGGELDSYLLATNDLYRDFILLDPCDADAVNDFFNGDETGKGLNSTCKGSS 218

Query: 361 VRSKTRKSAFQSPRR 405
            R      +FQSP R
Sbjct: 219 PR-----KSFQSPSR 228


>ref|XP_002885164.1| hypothetical protein ARALYDRAFT_897993 [Arabidopsis lyrata subsp.
           lyrata] gi|297331004|gb|EFH61423.1| hypothetical protein
           ARALYDRAFT_897993 [Arabidopsis lyrata subsp. lyrata]
          Length = 683

 Score =  135 bits (339), Expect = 5e-30
 Identities = 69/130 (53%), Positives = 85/130 (65%)
 Frame = +1

Query: 7   TSGRPEGEDSNAVVDDENEPFLGLDDVPLEAKNSLDDGHNKGDTSNLFVKPPANFVVLEG 186
           TS   E   S  V ++EN+ F  +DD+P++ KN LD         + FVKPPAN VVLEG
Sbjct: 104 TSNEAEASSSRQVDEEENDLFWNVDDIPVDTKNRLDSSVGGDTCPSQFVKPPANLVVLEG 163

Query: 187 DCFDSIGDVGELESYLLATHDLYRDFILLDPCDAGAIDKYLEEYKTCRGSNIAHRGSSVR 366
           DC D+ GD GELESYLLAT  LYRDFILLDPCDA A++++L +    +G N AHRGSSVR
Sbjct: 164 DCLDTSGDGGELESYLLATTHLYRDFILLDPCDAVAVNEFLGDDYAGKGKNNAHRGSSVR 223

Query: 367 SKTRKSAFQS 396
                S  +S
Sbjct: 224 KSFHSSVGRS 233


>ref|NP_188295.2| condensin-2 complex subunit H2 [Arabidopsis thaliana]
           gi|75274279|sp|Q9LUR0.1|CNDH2_ARATH RecName:
           Full=Condensin-2 complex subunit H2; AltName:
           Full=Chromosome-associated protein H2; Short=AtCAP-H2;
           AltName: Full=Non-SMC condensin II complex subunit H2;
           AltName: Full=Protein HYPERSENSITIVE TO EXCESS BORON 2;
           Short=Hypersensitive to excess B 2
           gi|11994628|dbj|BAB02765.1| unnamed protein product
           [Arabidopsis thaliana] gi|62533249|dbj|BAD95574.1|
           chromosoma associate protein subunit H2 [Arabidopsis
           thaliana] gi|110741945|dbj|BAE98913.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332642337|gb|AEE75858.1| condensin-2 complex subunit
           H2 [Arabidopsis thaliana]
          Length = 683

 Score =  134 bits (337), Expect = 8e-30
 Identities = 69/130 (53%), Positives = 85/130 (65%)
 Frame = +1

Query: 7   TSGRPEGEDSNAVVDDENEPFLGLDDVPLEAKNSLDDGHNKGDTSNLFVKPPANFVVLEG 186
           TS   E   S  V ++EN+ F  +DD+P++ KN LD         + FVKPPAN VVLEG
Sbjct: 104 TSNENEASSSRQVDEEENDLFWNVDDIPVDTKNRLDSSVGGDTCPSQFVKPPANLVVLEG 163

Query: 187 DCFDSIGDVGELESYLLATHDLYRDFILLDPCDAGAIDKYLEEYKTCRGSNIAHRGSSVR 366
           DC D+ GD GELESYLLAT  LYRDFILLDPCDA A++++L +    +G N AHRGSSVR
Sbjct: 164 DCLDTSGDGGELESYLLATTHLYRDFILLDPCDAVAVNEFLGDNYGGKGRNSAHRGSSVR 223

Query: 367 SKTRKSAFQS 396
                S  +S
Sbjct: 224 KSFHSSVGRS 233


>ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|222838580|gb|EEE76945.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score =  133 bits (334), Expect = 2e-29
 Identities = 72/135 (53%), Positives = 90/135 (66%)
 Frame = +1

Query: 1   EETSGRPEGEDSNAVVDDENEPFLGLDDVPLEAKNSLDDGHNKGDTSNLFVKPPANFVVL 180
           E  S +PE   S AV DD+N+ F   DDVP+E +N LD   +K  +   FVKPPAN +VL
Sbjct: 98  EGASVQPEQSGSQAVSDDDNDQFWVSDDVPVEPRNYLDASTSKDASFYHFVKPPANLIVL 157

Query: 181 EGDCFDSIGDVGELESYLLATHDLYRDFILLDPCDAGAIDKYLEEYKTCRGSNIAHRGSS 360
           EGDC D+ GD GELESYLLAT+DLYRDFILL+PCDA A++ +L+   T +    ++RGSS
Sbjct: 158 EGDCLDTSGDGGELESYLLATNDLYRDFILLNPCDAIAVNDFLKADDTRKAQYGSYRGSS 217

Query: 361 VRSKTRKSAFQSPRR 405
            R       FQSP R
Sbjct: 218 TR-----KTFQSPTR 227


>emb|CBI22967.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score =  126 bits (316), Expect = 2e-27
 Identities = 72/135 (53%), Positives = 92/135 (68%)
 Frame = +1

Query: 1    EETSGRPEGEDSNAVVDDENEPFLGLDDVPLEAKNSLDDGHNKGDTSNLFVKPPANFVVL 180
            E T  + E   S+ V D+E++ F  LDDVP+E +N LD   +K  + N FVK PAN VVL
Sbjct: 704  ERTPIQHEEGGSHVVPDEEDDLFWCLDDVPVEPRNCLDSTTSKDASLNQFVKAPANLVVL 763

Query: 181  EGDCFDSIGDVGELESYLLATHDLYRDFILLDPCDAGAIDKYLEEYKTCRGSNIAHRGSS 360
            EGD   + GD GEL+SYLLAT+DLYRDFILLDPCDA A+D +L+  K  +G N  ++  S
Sbjct: 764  EGD---ATGDGGELDSYLLATNDLYRDFILLDPCDAVAVDSFLKGDKDSKGLNGDYKSGS 820

Query: 361  VRSKTRKSAFQSPRR 405
            + SK+ KS FQSP R
Sbjct: 821  LNSKSCKS-FQSPSR 834


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