BLASTX nr result

ID: Cimicifuga21_contig00035884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035884
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532784.1| pentatricopeptide repeat-containing protein,...    62   6e-08
ref|XP_002267956.2| PREDICTED: putative callose synthase 8-like ...    59   7e-07
ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [S...    56   4e-06
ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea ma...    56   4e-06

>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/54 (57%), Positives = 41/54 (75%)
 Frame = +2

Query: 11  FFPAAGLLRSCLMEGMKVLSSAQRAVISGLRITGYRREANKLRSAIQMARHLRY 172
           F  A+ LL SCL  GMK+L SAQR VISGLR +G+++EA KL+S I++AR L +
Sbjct: 434 FHRASKLLLSCLRSGMKILPSAQRVVISGLRYSGFQKEARKLKSKIKLARMLHH 487


>ref|XP_002267956.2| PREDICTED: putative callose synthase 8-like [Vitis vinifera]
          Length = 1907

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
 Frame = +1

Query: 331  KVVKIAQDIFDIIMHEMITHGSRLLDMLFCPQPFEG----------IKHL-LLLVTEEAA 477
            KVVK+ QDIF+++ H+M+T  SR+LD+L+  +  EG          IK   LLL  E+ A
Sbjct: 976  KVVKVLQDIFEVVTHDMMTDSSRILDLLYSSEQIEGDTDNASLHKQIKRFHLLLTVEDTA 1035

Query: 478  MQIL*TWKLGGTFHFCYIPFYGYMPCAPKVHNMLSF 585
              +    +      F     +  MP APKV NM+SF
Sbjct: 1036 TDMPVNLEARRRISFFATSLFMDMPNAPKVRNMMSF 1071


>ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
           gi|241936250|gb|EES09395.1| hypothetical protein
           SORBIDRAFT_05g004830 [Sorghum bicolor]
          Length = 462

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = +2

Query: 20  AAGLLRSCLMEGMKVLSSAQRAVISGLRITGYRREANKLRSAIQMARHLR 169
           A+  LR CL EG  VL+SA+RAVISGLR  G++ +  K+RSA+ MAR LR
Sbjct: 412 ASKFLRICLHEGNNVLASAKRAVISGLRSAGFKNDLRKVRSALYMARLLR 461


>ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
           gi|238006488|gb|ACR34279.1| unknown [Zea mays]
           gi|413925463|gb|AFW65395.1| hypothetical protein
           ZEAMMB73_565010 [Zea mays]
          Length = 462

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = +2

Query: 20  AAGLLRSCLMEGMKVLSSAQRAVISGLRITGYRREANKLRSAIQMARHLR 169
           A+  LR CL EG  VL+SA+RAVISGLR  G++ +  K+RSA+ MAR LR
Sbjct: 412 ASKFLRICLHEGNNVLASAKRAVISGLRSAGFKNDLRKVRSALYMARLLR 461


Top