BLASTX nr result

ID: Cimicifuga21_contig00035852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035852
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17483.3| unnamed protein product [Vitis vinifera]              179   3e-43
ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat...   179   3e-43
emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]   179   3e-43
ref|XP_002310258.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40
ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   156   2e-36

>emb|CBI17483.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  179 bits (453), Expect = 3e-43
 Identities = 82/112 (73%), Positives = 97/112 (86%)
 Frame = -2

Query: 486 KDDVVWSSLLTACRARGDIERGRRAAAQILELNPNCAVTHITLCNIYSDRGKWQDAAGVR 307
           +DDVVWS+LL ACR  GD+ERGRR A +IL+L PNCA THITL NIY+ +GKW++AA +R
Sbjct: 500 RDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIR 559

Query: 306 KQMRSKGVIKEPGWSWIKVKDQVSAFVAGDHSHAQGDDIYSMLELLASRTEM 151
           K M+SKGVIKEPGWSWIKVKD V AFVAGD SH QG+DIY+ML+LLASRTE+
Sbjct: 560 KLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTEL 611


>ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  179 bits (453), Expect = 3e-43
 Identities = 82/112 (73%), Positives = 97/112 (86%)
 Frame = -2

Query: 486 KDDVVWSSLLTACRARGDIERGRRAAAQILELNPNCAVTHITLCNIYSDRGKWQDAAGVR 307
           +DDVVWS+LL ACR  GD+ERGRR A +IL+L PNCA THITL NIY+ +GKW++AA +R
Sbjct: 586 RDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIR 645

Query: 306 KQMRSKGVIKEPGWSWIKVKDQVSAFVAGDHSHAQGDDIYSMLELLASRTEM 151
           K M+SKGVIKEPGWSWIKVKD V AFVAGD SH QG+DIY+ML+LLASRTE+
Sbjct: 646 KLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTEL 697


>emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  179 bits (453), Expect = 3e-43
 Identities = 82/112 (73%), Positives = 97/112 (86%)
 Frame = -2

Query: 486 KDDVVWSSLLTACRARGDIERGRRAAAQILELNPNCAVTHITLCNIYSDRGKWQDAAGVR 307
           +DDVVWS+LL ACR  GD+ERGRR A +IL+L PNCA THITL NIY+ +GKW++AA +R
Sbjct: 586 RDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIR 645

Query: 306 KQMRSKGVIKEPGWSWIKVKDQVSAFVAGDHSHAQGDDIYSMLELLASRTEM 151
           K M+SKGVIKEPGWSWIKVKD V AFVAGD SH QG+DIY+ML+LLASRTE+
Sbjct: 646 KLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTEL 697


>ref|XP_002310258.1| predicted protein [Populus trichocarpa] gi|222853161|gb|EEE90708.1|
           predicted protein [Populus trichocarpa]
          Length = 666

 Score =  167 bits (424), Expect = 6e-40
 Identities = 75/112 (66%), Positives = 97/112 (86%)
 Frame = -2

Query: 486 KDDVVWSSLLTACRARGDIERGRRAAAQILELNPNCAVTHITLCNIYSDRGKWQDAAGVR 307
           +DDVVWS+LL ACR  GD++ G+RAA +IL+L+PNCAVTHITL N+Y+ +GKW++AA VR
Sbjct: 538 RDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVR 597

Query: 306 KQMRSKGVIKEPGWSWIKVKDQVSAFVAGDHSHAQGDDIYSMLELLASRTEM 151
           K M+SKGV+KEPGWSWIK KD+VSAFV+GD SH +G+ IY +L+LLAS+ EM
Sbjct: 598 KMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAEM 649


>ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/111 (63%), Positives = 93/111 (83%)
 Frame = -2

Query: 483 DDVVWSSLLTACRARGDIERGRRAAAQILELNPNCAVTHITLCNIYSDRGKWQDAAGVRK 304
           DDVVWS+LL ACR  GD++ G+RAAA++L+L+PNCA THITL NI++ +GKW++AA +R 
Sbjct: 587 DDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRM 646

Query: 303 QMRSKGVIKEPGWSWIKVKDQVSAFVAGDHSHAQGDDIYSMLELLASRTEM 151
            M+SKGV+KEPGWS +KVKD V AFV+GD SH QG+DIY++LE LAS  E+
Sbjct: 647 LMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGMEI 697


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