BLASTX nr result

ID: Cimicifuga21_contig00035844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035844
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518295.1| DNA binding protein, putative [Ricinus commu...    88   6e-16
ref|XP_002300300.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002310318.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002528911.1| DNA binding protein, putative [Ricinus commu...    82   3e-14
ref|XP_002313947.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14

>ref|XP_002518295.1| DNA binding protein, putative [Ricinus communis]
           gi|223542515|gb|EEF44055.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 309

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/64 (70%), Positives = 51/64 (79%)
 Frame = +3

Query: 3   KHKGVLVKTLAEIEKLNLSVVNSSVIPFGSSTLDITVMAQMDKEFDMKVKDLVKKLRLAF 182
           K KGVL KT+AEIEKL+LSV NSSV+ FGSS LD+T++AQMD EF M VKDLVK L  AF
Sbjct: 246 KRKGVLEKTIAEIEKLHLSVTNSSVLTFGSSALDVTIIAQMDNEFSMSVKDLVKDLHSAF 305

Query: 183 LQFM 194
             FM
Sbjct: 306 KLFM 309


>ref|XP_002300300.1| predicted protein [Populus trichocarpa] gi|222847558|gb|EEE85105.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/64 (64%), Positives = 53/64 (82%)
 Frame = +3

Query: 3   KHKGVLVKTLAEIEKLNLSVVNSSVIPFGSSTLDITVMAQMDKEFDMKVKDLVKKLRLAF 182
           K+KGVL KT+AE+EKL+LSV+NSSV+ FG+  LD+T++AQMD +F+M VKDLVK L  AF
Sbjct: 119 KNKGVLEKTVAEVEKLHLSVINSSVLTFGTCALDVTIIAQMDIDFNMSVKDLVKTLHSAF 178

Query: 183 LQFM 194
             FM
Sbjct: 179 QYFM 182


>ref|XP_002310318.1| predicted protein [Populus trichocarpa] gi|222853221|gb|EEE90768.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/71 (60%), Positives = 56/71 (78%)
 Frame = +3

Query: 9   KGVLVKTLAEIEKLNLSVVNSSVIPFGSSTLDITVMAQMDKEFDMKVKDLVKKLRLAFLQ 188
           +GV +K L+EIE L+LSVVNSSV+ FG+STLD+TV+AQMD +F + +KDLVKKLRLA L+
Sbjct: 295 QGVGIKILSEIENLHLSVVNSSVLVFGNSTLDVTVIAQMDNDFSLTMKDLVKKLRLACLK 354

Query: 189 FM*KIVPKRIV 221
               I+P   V
Sbjct: 355 LSCAIIPSSCV 365


>ref|XP_002528911.1| DNA binding protein, putative [Ricinus communis]
           gi|223531665|gb|EEF33491.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 331

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/64 (60%), Positives = 53/64 (82%)
 Frame = +3

Query: 3   KHKGVLVKTLAEIEKLNLSVVNSSVIPFGSSTLDITVMAQMDKEFDMKVKDLVKKLRLAF 182
           K +GV+ K L E+E L+LS++N++V+PFGSSTLDIT++AQMD+   M VKDLVK LR+A 
Sbjct: 268 KQQGVVPKILHEVENLHLSIINNTVLPFGSSTLDITIIAQMDENNSMAVKDLVKNLRVAL 327

Query: 183 LQFM 194
           L+FM
Sbjct: 328 LKFM 331


>ref|XP_002313947.1| predicted protein [Populus trichocarpa] gi|222850355|gb|EEE87902.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/64 (65%), Positives = 52/64 (81%)
 Frame = +3

Query: 3   KHKGVLVKTLAEIEKLNLSVVNSSVIPFGSSTLDITVMAQMDKEFDMKVKDLVKKLRLAF 182
           K KGVL KT+AEIEKL+LSV+NSSV+ FG+S L +T +AQMD +F+M +KDLVK LR AF
Sbjct: 261 KRKGVLEKTVAEIEKLHLSVINSSVLAFGTSALHVTFIAQMDIDFNMSLKDLVKTLRSAF 320

Query: 183 LQFM 194
             FM
Sbjct: 321 EFFM 324


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