BLASTX nr result

ID: Cimicifuga21_contig00035838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035838
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera]    50   2e-12
emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]    52   4e-11
emb|CAN67565.1| hypothetical protein VITISV_020484 [Vitis vinifera]    48   2e-09
emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]    54   2e-09
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]    53   2e-09

>emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera]
          Length = 456

 Score = 50.1 bits (118), Expect(2) = 2e-12
 Identities = 21/41 (51%), Positives = 25/41 (60%)
 Frame = +1

Query: 31  KWFTDSGASTHVTPDLTNLSIHDDYTGQDKVAVGNGTGQLH 153
           +W+ DSGA+ HVT D  NL+I   Y G D V VGNG    H
Sbjct: 334 QWYVDSGANIHVTSDTVNLAISQPYEGTDTVGVGNGAASAH 374



 Score = 46.6 bits (109), Expect(2) = 2e-12
 Identities = 21/52 (40%), Positives = 31/52 (59%)
 Frame = +2

Query: 137 VQDNSTGKTLFQGKSENGLYPINFHRHLKNKFSPPFALIGERVNSPLWHQRL 292
           V+D  TG+TL  G S+ GLYPIN  +   +KF      +G + ++ +WH RL
Sbjct: 398 VKDLKTGETLMMGSSDRGLYPINLQQLSSSKFHVFSMTVGVKASTAIWHCRL 449


>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
          Length = 1442

 Score = 52.0 bits (123), Expect(2) = 4e-11
 Identities = 22/39 (56%), Positives = 29/39 (74%)
 Frame = +1

Query: 28  QKWFTDSGASTHVTPDLTNLSIHDDYTGQDKVAVGNGTG 144
           QKW  DS AS ++T DL NLSIH +Y G D+V +G+G+G
Sbjct: 434 QKWLLDSAASHNITGDLQNLSIHSEYDGTDEVVLGDGSG 472



 Score = 40.4 bits (93), Expect(2) = 4e-11
 Identities = 23/57 (40%), Positives = 30/57 (52%)
 Frame = +2

Query: 128 LAMVQDNSTGKTLFQGKSENGLYPINFHRHLKNKFSPPFALIGERVNSPLWHQRLGH 298
           LA+  +  TG  L +G  ENG+Y   F   L   FS   A + ER+    WH+RLGH
Sbjct: 473 LAVSHEPITGAILLRGSCENGIYI--FSESLVGNFSQKVANVHERMLLDGWHKRLGH 527


>emb|CAN67565.1| hypothetical protein VITISV_020484 [Vitis vinifera]
          Length = 547

 Score = 47.8 bits (112), Expect(2) = 2e-09
 Identities = 24/53 (45%), Positives = 30/53 (56%)
 Frame = +2

Query: 137 VQDNSTGKTLFQGKSENGLYPINFHRHLKNKFSPPFALIGERVNSPLWHQRLG 295
           V++N TGK L   + ENGLYPI   + L+NK     A IG   +   WH RLG
Sbjct: 275 VKENQTGKMLLHRQVENGLYPIGGSKSLQNKLLCLMATIGITTSMDHWHSRLG 327



 Score = 39.3 bits (90), Expect(2) = 2e-09
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 1   ASSGVSNGNQKWFTDSGASTHVTPDLTNLSIHDDYTGQD 117
           A S  +  +Q W+ DSGA+ H+T +   L++   +TGQD
Sbjct: 215 AESNATYEHQVWYADSGANAHITSEAKTLTLQQPFTGQD 253


>emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]
          Length = 1044

 Score = 53.5 bits (127), Expect(2) = 2e-09
 Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +1

Query: 7   SGVSNGNQ-KWFTDSGASTHVTPDLTNLSIHDDYTGQDKVAVGNGTG 144
           +G S+G + KW  DS AS ++T D+ NLSIH +Y G D+V +G+GTG
Sbjct: 198 AGTSDGQENKWLIDSAASHNITGDIKNLSIHSEYDGTDEVLLGDGTG 244



 Score = 33.1 bits (74), Expect(2) = 2e-09
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +2

Query: 149 STGKTLFQGKSENGLYPINFHRHLKNKFSPPF-ALIGERVNSPLWHQRLGH 298
           STG  L +G  ENG+Y   F   +    +P   A + ER +   WH+RLGH
Sbjct: 249 STGVILLRGACENGVYI--FPNSMVAPSTPKMVAYVHERTSIDGWHKRLGH 297


>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
          Length = 1144

 Score = 52.8 bits (125), Expect(2) = 2e-09
 Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = +1

Query: 7   SGVSNGN-QKWFTDSGASTHVTPDLTNLSIHDDYTGQDKVAVGNGTG 144
           +G S+G   KW  DS AS ++T D+ NLSIH +Y G D+V +G+GTG
Sbjct: 322 AGTSDGQANKWLIDSAASHNITGDIKNLSIHSEYDGTDEVLLGDGTG 368



 Score = 33.5 bits (75), Expect(2) = 2e-09
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +2

Query: 149 STGKTLFQGKSENGLYPINFHRHLKNKFSPPF-ALIGERVNSPLWHQRLGH 298
           STG  L +G  ENG+Y   F   +    +P   A + ER +   WH+RLGH
Sbjct: 373 STGAILLRGACENGVYI--FPNSMMAPSTPKMVAYVHERTSINGWHKRLGH 421


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