BLASTX nr result

ID: Cimicifuga21_contig00035786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035786
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   123   1e-26
emb|CBI35900.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...   115   4e-24
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g...   111   5e-23

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
 Frame = -2

Query: 374  VVYRHDASKFTRLKSECADF-GELTSSSSELIKNMTTMSMPQMINTSFNWQETASSFIYR 198
            +V+R D  KF  LK E  +F   +T    +L++N+  M +  MI    NWQETA+ F+ R
Sbjct: 3193 MVFRSDPGKFKDLKHEFGEFLKRVTYLVDDLMRNIEVMDLQVMIGEVCNWQETATCFVNR 3252

Query: 197  LSDEYAAYADITQPVQVAVYEMKLGLSLVVSSALQKPFLAKMEEGSSERIMETIYSFMQF 18
            LSDEYAAY DI QPVQVAVYEMKLGLSLV+SS+LQK F  ++ + + + I+ TIYSF++F
Sbjct: 3253 LSDEYAAYTDIIQPVQVAVYEMKLGLSLVLSSSLQKGFQNRVMQDNMDGILATIYSFIRF 3312

Query: 17   PR 12
            PR
Sbjct: 3313 PR 3314


>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
 Frame = -2

Query: 374  VVYRHDASKFTRLKSECADF-GELTSSSSELIKNMTTMSMPQMINTSFNWQETASSFIYR 198
            +V+R D  KF  LK E  +F   +T    +L++N+  M +  MI    NWQETA+ F+ R
Sbjct: 3090 MVFRSDPGKFKDLKHEFGEFLKRVTYLVDDLMRNIEVMDLQVMIGEVCNWQETATCFVNR 3149

Query: 197  LSDEYAAYADITQPVQVAVYEMKLGLSLVVSSALQKPFLAKMEEGSSERIMETIYSFMQF 18
            LSDEYAAY DI QPVQVAVYEMKLGLSLV+SS+LQK F  ++ + + + I+ TIYSF++F
Sbjct: 3150 LSDEYAAYTDIIQPVQVAVYEMKLGLSLVLSSSLQKGFQNRVMQDNMDGILATIYSFIRF 3209

Query: 17   PR 12
            PR
Sbjct: 3210 PR 3211


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/121 (50%), Positives = 84/121 (69%)
 Frame = -2

Query: 374  VVYRHDASKFTRLKSECADFGELTSSSSELIKNMTTMSMPQMINTSFNWQETASSFIYRL 195
            +V+R +  KF  L+ EC +F +       L+ N+  M + Q++  + NWQ TA+SFI RL
Sbjct: 3231 MVFRCNPLKFNALRKECGEFLKPARMVVGLVDNIEGMDLQQVLEQASNWQATATSFIDRL 3290

Query: 194  SDEYAAYADITQPVQVAVYEMKLGLSLVVSSALQKPFLAKMEEGSSERIMETIYSFMQFP 15
            SDEY  Y D+ QP QVAVYEMKLGLSLV+S AL K  L +++E + +R+ME+IYSFM+FP
Sbjct: 3291 SDEYKEYIDLAQPFQVAVYEMKLGLSLVLSFALLKKVLNRIKEDNMDRVMESIYSFMRFP 3350

Query: 14   R 12
            R
Sbjct: 3351 R 3351


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score =  115 bits (288), Expect = 4e-24
 Identities = 56/124 (45%), Positives = 85/124 (68%)
 Frame = -2

Query: 374  VVYRHDASKFTRLKSECADFGELTSSSSELIKNMTTMSMPQMINTSFNWQETASSFIYRL 195
            +V+R + SKF+ L+ +C +F        +L+ N+  +   Q +    +WQ+TA+ FI +L
Sbjct: 3173 MVFRSNPSKFSALRKDCKEFFRRVMVVMDLVSNVEVVEFQQFLIQVSDWQKTATCFIEQL 3232

Query: 194  SDEYAAYADITQPVQVAVYEMKLGLSLVVSSALQKPFLAKMEEGSSERIMETIYSFMQFP 15
            S++Y  Y D+ QPVQVA+YEMKLGLSLV+S+AL K    K+E  + E++ME+I SFM+FP
Sbjct: 3233 SNDYKEYIDVAQPVQVAIYEMKLGLSLVLSAALWKRNSNKIEVDNMEQVMESICSFMRFP 3292

Query: 14   RGFG 3
            RG+G
Sbjct: 3293 RGYG 3296


>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
            [Medicago truncatula]
          Length = 5078

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/121 (45%), Positives = 82/121 (67%)
 Frame = -2

Query: 374  VVYRHDASKFTRLKSECADFGELTSSSSELIKNMTTMSMPQMINTSFNWQETASSFIYRL 195
            +V+R ++ K+ +L +EC +F +  +S   L+ N+    + Q+I+ + +WQETA  FI RL
Sbjct: 2939 IVFRSESWKYKKLMNECDEFLKHIASLEVLVGNVEAEDLQQVIDRTHSWQETAMCFINRL 2998

Query: 194  SDEYAAYADITQPVQVAVYEMKLGLSLVVSSALQKPFLAKMEEGSSERIMETIYSFMQFP 15
            +DEY AY DI QP+QVAVYEMK GLSLV+SS L+K +L K+   +   + + IY  M+FP
Sbjct: 2999 TDEYTAYNDIIQPIQVAVYEMKFGLSLVLSSFLEKEYLRKVGHENINLVTDMIYILMRFP 3058

Query: 14   R 12
            R
Sbjct: 3059 R 3059


Top