BLASTX nr result

ID: Cimicifuga21_contig00035731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035731
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39923.1| unknown [Lotus japonicus]                               77   1e-12
ref|XP_003591419.1| Multidrug resistance protein ABC transporter...    77   1e-12
ref|XP_003521590.1| PREDICTED: uncharacterized protein LOC100801...    74   1e-11
gb|AFK49072.1| unknown [Medicago truncatula]                           72   5e-11
ref|NP_001236416.1| uncharacterized protein LOC100527719 [Glycin...    72   5e-11

>gb|AFK39923.1| unknown [Lotus japonicus]
          Length = 196

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
 Frame = +3

Query: 147 MGNHISN-QLFDMTGKVVLSNGTVHEFDHPLTVAELMMEHPQQAVVEFHS-LKTRNKLTP 320
           MGNHIS+    D TGK+V  +G+V EFD PLTVAELM+EHPQQ VVEFHS L  + + TP
Sbjct: 1   MGNHISSFPASDATGKIVYCDGSVQEFDQPLTVAELMLEHPQQVVVEFHSALNHQKRPTP 60

Query: 321 LPS 329
           LP+
Sbjct: 61  LPA 63


>ref|XP_003591419.1| Multidrug resistance protein ABC transporter family protein
           [Medicago truncatula] gi|355480467|gb|AES61670.1|
           Multidrug resistance protein ABC transporter family
           protein [Medicago truncatula]
          Length = 192

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/61 (59%), Positives = 46/61 (75%)
 Frame = +3

Query: 147 MGNHISNQLFDMTGKVVLSNGTVHEFDHPLTVAELMMEHPQQAVVEFHSLKTRNKLTPLP 326
           MGN +S +  D TGKVV  +G+VHEFD  +TVAELMM+HPQ+ VVEFHS   + + TPLP
Sbjct: 1   MGNQVSFRPSDPTGKVVFLDGSVHEFDEAITVAELMMDHPQKVVVEFHSAVNQKRPTPLP 60

Query: 327 S 329
           +
Sbjct: 61  A 61


>ref|XP_003521590.1| PREDICTED: uncharacterized protein LOC100801308 [Glycine max]
          Length = 199

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/61 (59%), Positives = 44/61 (72%)
 Frame = +3

Query: 147 MGNHISNQLFDMTGKVVLSNGTVHEFDHPLTVAELMMEHPQQAVVEFHSLKTRNKLTPLP 326
           MGN I+    D TGK+V  NG+V EFD PLTVAELM+EHPQQ V++FHS     + TPLP
Sbjct: 1   MGNQIAR---DATGKIVYWNGSVQEFDEPLTVAELMLEHPQQVVLDFHSAVKEKRPTPLP 57

Query: 327 S 329
           +
Sbjct: 58  A 58


>gb|AFK49072.1| unknown [Medicago truncatula]
          Length = 197

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/61 (55%), Positives = 44/61 (72%)
 Frame = +3

Query: 147 MGNHISNQLFDMTGKVVLSNGTVHEFDHPLTVAELMMEHPQQAVVEFHSLKTRNKLTPLP 326
           MGNHIS   F  T K++  +G+V EFD P+TVAELM++HP+  VVEFHS   + K TPLP
Sbjct: 1   MGNHIS---FHATTKIIYYDGSVQEFDQPITVAELMLDHPKHVVVEFHSAMNQKKPTPLP 57

Query: 327 S 329
           +
Sbjct: 58  A 58


>ref|NP_001236416.1| uncharacterized protein LOC100527719 [Glycine max]
           gi|255633040|gb|ACU16875.1| unknown [Glycine max]
          Length = 199

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/61 (57%), Positives = 44/61 (72%)
 Frame = +3

Query: 147 MGNHISNQLFDMTGKVVLSNGTVHEFDHPLTVAELMMEHPQQAVVEFHSLKTRNKLTPLP 326
           MGN I+    D TGK+V  +G+V EFD PLTVAELM+EHPQQ V++FHS     + TPLP
Sbjct: 1   MGNQIAR---DATGKIVYWDGSVQEFDEPLTVAELMLEHPQQVVLDFHSAVKEKRPTPLP 57

Query: 327 S 329
           +
Sbjct: 58  A 58


Top