BLASTX nr result

ID: Cimicifuga21_contig00035660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035660
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526570.1| brca1 associated ring domain, putative [Rici...    70   2e-10
ref|XP_003625346.1| PHD finger protein 11-like protein [Medicago...    65   7e-09
ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    63   3e-08
ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    63   3e-08
ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002526570.1| brca1 associated ring domain, putative [Ricinus communis]
           gi|223534131|gb|EEF35848.1| brca1 associated ring
           domain, putative [Ricinus communis]
          Length = 744

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/89 (40%), Positives = 44/89 (49%)
 Frame = -3

Query: 269 DTEDFLMLCPTHSLRKFPXXXXXXXXXXXENYHSNDEIASQQADKIWAASPGAAKALVIC 90
           D ++FL+LCP+HS  +FP              H        Q    WA S   AK  V C
Sbjct: 455 DYDNFLVLCPSHSSVRFPDEKKSKSKKHSLERHHVPTQVPPQQPNFWAESATGAKEWVFC 514

Query: 89  GSDLSSSEKSLLFRFGKITGATVSKVWDP 3
           GS LSS EKSLL  FG++ G  V+K W P
Sbjct: 515 GSALSSEEKSLLIEFGRMIGVPVTKFWQP 543


>ref|XP_003625346.1| PHD finger protein 11-like protein [Medicago truncatula]
           gi|355500361|gb|AES81564.1| PHD finger protein 11-like
           protein [Medicago truncatula]
          Length = 687

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/87 (40%), Positives = 48/87 (55%)
 Frame = -3

Query: 269 DTEDFLMLCPTHSLRKFPXXXXXXXXXXXENYHSNDEIASQQADKIWAASPGAAKALVIC 90
           D  D+L+LCP+HS  KFP           + +  +  + SQQ++++ A   G  K +V C
Sbjct: 420 DHVDYLLLCPSHSNVKFPNEKSNLDKQATQKHPVSSHLPSQQSNQLGAVQ-GDGKKMVFC 478

Query: 89  GSDLSSSEKSLLFRFGKITGATVSKVW 9
           GS LS+ EK LL  F    GATVSK W
Sbjct: 479 GSALSNEEKVLLINFASKVGATVSKCW 505


>ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
           sativus]
          Length = 679

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
 Frame = -3

Query: 269 DTEDFLMLCPTHSLRKFPXXXXXXXXXXXENYHSNDEIASQQADKI--WAASPGAAKALV 96
           D ++FL+LCP+H+  +FP            N+   + ++S+    +  WA++        
Sbjct: 403 DMDNFLVLCPSHTSARFPDERSKPRKN---NFDVFNIVSSRNQKDLSNWASASDGVNKWT 459

Query: 95  ICGSDLSSSEKSLLFRFGKITGATVSKVWDP 3
            CGS LS+ E+++L +F K+TGATVSK+W P
Sbjct: 460 FCGSALSAEERNILVKFAKLTGATVSKLWKP 490


>ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
           sativus]
          Length = 679

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
 Frame = -3

Query: 269 DTEDFLMLCPTHSLRKFPXXXXXXXXXXXENYHSNDEIASQQADKI--WAASPGAAKALV 96
           D ++FL+LCP+H+  +FP            N+   + ++S+    +  WA++        
Sbjct: 403 DMDNFLVLCPSHTSARFPDERSKPRKN---NFDVFNIVSSRNQKDLSNWASASDGVNKWT 459

Query: 95  ICGSDLSSSEKSLLFRFGKITGATVSKVWDP 3
            CGS LS+ E+++L +F K+TGATVSK+W P
Sbjct: 460 FCGSALSAEERNILVKFAKLTGATVSKLWKP 490


>ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|222844846|gb|EEE82393.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/86 (39%), Positives = 44/86 (51%)
 Frame = -3

Query: 266 TEDFLMLCPTHSLRKFPXXXXXXXXXXXENYHSNDEIASQQADKIWAASPGAAKALVICG 87
           +E+FL+LC  HS  KFP           +       +A QQ++  W  S   AK  V CG
Sbjct: 109 SENFLVLCSAHSSVKFPSEKSKAKKHNQKTSSVLTSVAPQQSN-FWVGSCNGAKKWVFCG 167

Query: 86  SDLSSSEKSLLFRFGKITGATVSKVW 9
           S LSS EK LL +FG + G  V+K W
Sbjct: 168 SALSSEEKCLLVKFGSMIGVPVNKFW 193


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