BLASTX nr result

ID: Cimicifuga21_contig00035641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035641
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   146   4e-33
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              146   4e-33
ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32
ref|XP_002320283.1| predicted protein [Populus trichocarpa] gi|2...   140   2e-31
ref|XP_002515642.1| RNA binding protein, putative [Ricinus commu...   138   1e-30

>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  146 bits (368), Expect = 4e-33
 Identities = 75/187 (40%), Positives = 116/187 (62%), Gaps = 7/187 (3%)
 Frame = -2

Query: 678  PFTKSSHLWEIVESMEVFRLIPQYPHFRPLEKENEELREGIAMGYMLTFANLMERTCKAQ 499
            PF KSS +W  +E++EVF+ +PQ PHFRPLE   EE REG+A+G M+TF+ L+E+  K +
Sbjct: 1028 PFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLR 1087

Query: 498  LDDHESTFENKLEALDALEEHGFIVQPLRSRLKELLKIKDNYSQLDDKSKTTEKELID-- 325
             DD  S F + LEAL  LE HGF  +P++SR+ EL+ IKD   QL  ++K  E ++++  
Sbjct: 1088 FDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEHT 1147

Query: 324  -EKRRLD----ELQESITQFNTQLQALLTEKERENLKVTELERMADEIKESIQGIGLDFD 160
             EK ++D    E+ + + +   +    ++ KE ++ ++  L    D + ESIQ    DF+
Sbjct: 1148 HEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNESIQSARQDFE 1207

Query: 159  SVAAAPW 139
             VA +PW
Sbjct: 1208 RVATSPW 1214


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  146 bits (368), Expect = 4e-33
 Identities = 75/187 (40%), Positives = 116/187 (62%), Gaps = 7/187 (3%)
 Frame = -2

Query: 678  PFTKSSHLWEIVESMEVFRLIPQYPHFRPLEKENEELREGIAMGYMLTFANLMERTCKAQ 499
            PF KSS +W  +E++EVF+ +PQ PHFRPLE   EE REG+A+G M+TF+ L+E+  K +
Sbjct: 888  PFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLR 947

Query: 498  LDDHESTFENKLEALDALEEHGFIVQPLRSRLKELLKIKDNYSQLDDKSKTTEKELID-- 325
             DD  S F + LEAL  LE HGF  +P++SR+ EL+ IKD   QL  ++K  E ++++  
Sbjct: 948  FDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEHT 1007

Query: 324  -EKRRLD----ELQESITQFNTQLQALLTEKERENLKVTELERMADEIKESIQGIGLDFD 160
             EK ++D    E+ + + +   +    ++ KE ++ ++  L    D + ESIQ    DF+
Sbjct: 1008 HEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNESIQSARQDFE 1067

Query: 159  SVAAAPW 139
             VA +PW
Sbjct: 1068 RVATSPW 1074


>ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|222844511|gb|EEE82058.1|
            predicted protein [Populus trichocarpa]
          Length = 919

 Score =  144 bits (362), Expect = 2e-32
 Identities = 78/187 (41%), Positives = 115/187 (61%), Gaps = 7/187 (3%)
 Frame = -2

Query: 678  PFTKSSHLWEIVESMEVFRLIPQYPHFRPLEKENEELREGIAMGYMLTFANLMERTCKAQ 499
            PF K S +W  +ESMEVF++IPQ PHF PL +  EE REG A+G M+TFA+L E+    Q
Sbjct: 730  PFVKKSPVWNTIESMEVFQIIPQKPHFHPLTECKEEYREGSAIGIMVTFASLFEKISSLQ 789

Query: 498  LDDHESTFENKLEALDALEEHGFIVQPLRSRLKELLKIKDNYSQLDDKSKTTEKEL---I 328
             DD  S  E+ LE+L  LE+HGF +   R RL ELL IKD   ++ ++SK  E+++    
Sbjct: 790  FDDCRSILESTLESLVDLEKHGFDITVPRCRLNELLSIKDGQGEVINESKDAEEKIRVHT 849

Query: 327  DEKRRLDE----LQESITQFNTQLQALLTEKERENLKVTELERMADEIKESIQGIGLDFD 160
            DEKR+L+E    +++ IT+   +L     + + + L +++++  AD I E I+     F 
Sbjct: 850  DEKRKLEEKMSDIEKKITELQEELALTKAKMDVKGLDISKMQSHADAINERIKNARDHFV 909

Query: 159  SVAAAPW 139
             VA+APW
Sbjct: 910  KVASAPW 916


>ref|XP_002320283.1| predicted protein [Populus trichocarpa] gi|222861056|gb|EEE98598.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  140 bits (353), Expect = 2e-31
 Identities = 82/192 (42%), Positives = 115/192 (59%), Gaps = 7/192 (3%)
 Frame = -2

Query: 678 PFTKSSHLWEIVESMEVFRLIPQYPHFRPLEKENEELREGIAMGYMLTFANLMERTCKAQ 499
           PF K S +W  +ESMEVFR IPQ  HF PL +  EE REG A+G M+TFA+L ++    Q
Sbjct: 81  PFVKRSPVWNTIESMEVFRAIPQKLHFHPLTECKEEYREGSAIGIMVTFASLFDKITSLQ 140

Query: 498 LDDHESTFENKLEALDALEEHGFIVQPLRSRLKELLKIKDNYSQLDDKSKTTEKEL---I 328
            DD  S  E+ LE+L  LE+HGF +   R RL ELL IKD   ++ ++SK  E +L    
Sbjct: 141 FDDCRSILESTLESLLDLEKHGFDITVPRGRLNELLSIKDGQGEVLNESKDAEGKLRVHT 200

Query: 327 DEKRRLDE----LQESITQFNTQLQALLTEKERENLKVTELERMADEIKESIQGIGLDFD 160
           DEKR+L+E    +++ IT+   +L     +   +NL +++L+  A+ I E I+     F 
Sbjct: 201 DEKRKLEEKRNDIEKKITELQEELALTKAKMGIKNLDLSKLQSHANAINERIKNARDHFG 260

Query: 159 SVAAAPWN*RPP 124
            VA+APWN  PP
Sbjct: 261 KVASAPWN--PP 270


>ref|XP_002515642.1| RNA binding protein, putative [Ricinus communis]
            gi|223545236|gb|EEF46744.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 689

 Score =  138 bits (347), Expect = 1e-30
 Identities = 73/187 (39%), Positives = 117/187 (62%), Gaps = 7/187 (3%)
 Frame = -2

Query: 678  PFTKSSHLWEIVESMEVFRLIPQYPHFRPLEKENEELREGIAMGYMLTFANLMERTCKAQ 499
            PF KSS +W+ +ES+EVF+++PQ PHF PL    E  REG+AMG+ML+FA L+E+  K +
Sbjct: 503  PFLKSSLIWKNIESLEVFQVLPQKPHFSPLIGHKEASREGMAMGHMLSFAVLIEKMSKLR 562

Query: 498  LDDHESTFENKLEALDALEEHGFIVQPLRSRLKELLKIKDNYSQLDDKSKTT-------E 340
            +DD    FE+ +E L  LE HGF V+ +  RL++LL IKD   +L+D++K         +
Sbjct: 563  VDDGREVFESYMEVLAELEMHGFEVKAIAERLEKLLSIKDRCKRLEDEAKKVHIGMAEGK 622

Query: 339  KELIDEKRRLDELQESITQFNTQLQALLTEKERENLKVTELERMADEIKESIQGIGLDFD 160
             E I  +  +D+++E I+Q   Q    ++ K  ++ ++  L+  A+ + E I  +  +F+
Sbjct: 623  NEKIKLEEDIDKIEERISQLEEQRAMKVSMKMMKDSELITLQVNANAVNEDIVNMEHEFE 682

Query: 159  SVAAAPW 139
            +VAAAPW
Sbjct: 683  NVAAAPW 689


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