BLASTX nr result

ID: Cimicifuga21_contig00035587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035587
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66043.1| hypothetical protein VITISV_001198 [Vitis vinifera]    91   7e-17
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]    91   1e-16
emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]    91   1e-16
emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera]    91   1e-16
emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]    90   2e-16

>emb|CAN66043.1| hypothetical protein VITISV_001198 [Vitis vinifera]
          Length = 839

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/100 (48%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
 Frame = -3

Query: 293 RTRGVIEGWRVG---RDEVRISHLQFADDTVVFLGDDTNQIRWIGGILGCFKAVFGLGVN 123
           R  G I G+RVG   R+   +SHL FADDT++F   + +Q+R++      F+A+ GL VN
Sbjct: 469 RNGGFISGFRVGGRGREGXIVSHLLFADDTLIFCDAEADQLRYLSWTFMWFEAISGLKVN 528

Query: 122 LRKSRVFPVGAEIDIAAHATSLGCSTGTLPTSYLGLPLGA 3
           L K+   PVG  I +   A+ LGC  G+LPTSYLGLPLGA
Sbjct: 529 LSKTEAIPVGEGIPMETLASVLGCKIGSLPTSYLGLPLGA 568


>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
          Length = 4128

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
 Frame = -3

Query: 299  RGRTRGVIEGWRVG---RDEVRISHLQFADDTVVFLGDDTNQIRWIGGILGCFKAVFGLG 129
            R R    I G+RVG    + + +SHL FADDT++F   D +Q++++      F+A+ GL 
Sbjct: 3065 RARNGNFISGFRVGGRGSEGLVVSHLLFADDTLIFCDADADQLQYLSWTFMWFEAISGLK 3124

Query: 128  VNLRKSRVFPVGAEIDIAAHATSLGCSTGTLPTSYLGLPLGA 3
            VNL K+   PVG +I +   A  LGC  G+LPTSYLGLPLGA
Sbjct: 3125 VNLNKTEAIPVGEDIPMETLAAVLGCKIGSLPTSYLGLPLGA 3166



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/64 (48%), Positives = 41/64 (64%)
 Frame = -3

Query: 194  DTNQIRWIGGILGCFKAVFGLGVNLRKSRVFPVGAEIDIAAHATSLGCSTGTLPTSYLGL 15
            D+ Q+R++  +L  F+A+ GL VN  KS V PVG    +    + LGC  G LP+SYLGL
Sbjct: 1365 DSGQLRYLSWVLLWFEAISGLXVNRDKSEVIPVGRVDYLENIVSVLGCRIGNLPSSYLGL 1424

Query: 14   PLGA 3
            PLGA
Sbjct: 1425 PLGA 1428


>emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]
          Length = 1728

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
 Frame = -3

Query: 299  RGRTRGVIEGWRVG---RDEVRISHLQFADDTVVFLGDDTNQIRWIGGILGCFKAVFGLG 129
            R R    I G+RVG    + + +SHL FADDT++F   D +Q++++      F+A+ GL 
Sbjct: 745  RARNGNFISGFRVGGRGSEGLVVSHLLFADDTLIFCDADADQLQYLSWTFMWFEAISGLK 804

Query: 128  VNLRKSRVFPVGAEIDIAAHATSLGCSTGTLPTSYLGLPLGA 3
            VNL K+   PVG +I +   A  LGC  G+LPTSYLGLPLGA
Sbjct: 805  VNLNKTEAIPVGEDIPMETLAAVLGCKIGSLPTSYLGLPLGA 846


>emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera]
          Length = 1937

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
 Frame = -3

Query: 293  RTRGVIEGWRVG---RDEVRISHLQFADDTVVFLGDDTNQIRWIGGILGCFKAVFGLGVN 123
            R  G I G+RVG   R+ + +SHL FADDT++F   + +Q+R++      F+A+ GL VN
Sbjct: 1425 RNGGFISGFRVGGRGREGLIVSHLLFADDTLIFCDXEADQLRYLSWTFMWFEAISGLKVN 1484

Query: 122  LRKSRVFPVGAEIDIAAHATSLGCSTGTLPTSYLGLPLGA 3
            L K+   PVG  I +    + LGC  G+LPTSYLGLPLGA
Sbjct: 1485 LSKTEAIPVGEGIPMETLXSVLGCKIGSLPTSYLGLPLGA 1524


>emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]
          Length = 2095

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
 Frame = -3

Query: 299  RGRTRGVIEGWRV--GRDE-VRISHLQFADDTVVFLGDDTNQIRWIGGILGCFKAVFGLG 129
            R  + G + GW+V  GR E + ISHL FADDT+VF  D  +++ ++  +L  F+A  GL 
Sbjct: 1544 RAISGGYLAGWKVSGGRGEGMHISHLLFADDTLVFCEDSPDEMTYLSWLLMWFEACSGLR 1603

Query: 128  VNLRKSRVFPVGAEIDIAAHATSLGCSTGTLPTSYLGLPLGA 3
            +NL KS + PVG  ++I   A  LGC  G  P+SYLG+PLGA
Sbjct: 1604 INLEKSEIIPVGRVLNIEGLALELGCKVGGFPSSYLGMPLGA 1645


Top