BLASTX nr result

ID: Cimicifuga21_contig00035574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035574
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160586.1| PREDICTED: putative E3 ubiquitin-protein lig...    56   3e-06
ref|XP_004147147.1| PREDICTED: putative E3 ubiquitin-protein lig...    56   3e-06
emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]    55   5e-06
dbj|BAA95741.1| unnamed protein product [Arabidopsis thaliana]         55   8e-06
ref|XP_002883418.1| zinc finger family protein [Arabidopsis lyra...    55   8e-06

>ref|XP_004160586.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 487

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   MPCLNKIKGKNWGCPVCRAKVEQVVKIYIV 92
           M CLN+IK KNWGCPVCR K+ QV+K+Y+V
Sbjct: 458 MSCLNEIKTKNWGCPVCRTKINQVIKLYVV 487


>ref|XP_004147147.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 487

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   MPCLNKIKGKNWGCPVCRAKVEQVVKIYIV 92
           M CLN+IK KNWGCPVCR K+ QV+K+Y+V
Sbjct: 458 MSCLNEIKTKNWGCPVCRTKINQVIKLYVV 487


>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
          Length = 500

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   MPCLNKIKGKNWGCPVCRAKVEQVVKIYIV 92
           M CLN+IK K WGCPVCRAK++QVVK+Y V
Sbjct: 471 MSCLNEIKAKKWGCPVCRAKIDQVVKLYSV 500


>dbj|BAA95741.1| unnamed protein product [Arabidopsis thaliana]
          Length = 454

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   MPCLNKIKGKNWGCPVCRAKVEQVVKIYIV 92
           M CL +IK KNWGCPVCRAK++QV+K+Y V
Sbjct: 425 MSCLKEIKSKNWGCPVCRAKIDQVIKLYRV 454


>ref|XP_002883418.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329258|gb|EFH59677.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 462

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   MPCLNKIKGKNWGCPVCRAKVEQVVKIYIV 92
           M CL +IK KNWGCPVCRAK++QV+K+Y V
Sbjct: 433 MSCLKEIKSKNWGCPVCRAKIDQVIKLYRV 462


Top