BLASTX nr result

ID: Cimicifuga21_contig00035550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035550
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555102.1| PREDICTED: uncharacterized protein LOC100796...    93   1e-16
ref|XP_002323677.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-16
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                  92   3e-16
ref|XP_003537359.1| PREDICTED: uncharacterized protein LOC100786...    90   1e-15
ref|XP_003544056.1| PREDICTED: uncharacterized protein LOC100810...    86   2e-14

>ref|XP_003555102.1| PREDICTED: uncharacterized protein LOC100796026 [Glycine max]
          Length = 1109

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 30/245 (12%)
 Frame = -3

Query: 801 VKLDVLSFTGSKNPNLSIDWIEKIETIFSLKGFDDPMCVMLVET*LEGYALHWWKIYQKN 622
           +KL++  F G  +P   ++W  KIE +FS   +++   V L  T    YAL WW   QK 
Sbjct: 53  IKLNIPPFKGKNDPEAYLEWEMKIEHVFSCNNYEEDQKVKLAATEFSDYALVWWNKLQKE 112

Query: 621 RQLQGYPRTTSWTSMKRDLLPEFLPPTYE*DLSFMVMNLVKCFEVV*EYMDGFYMXXXXX 442
           R     P   +WT MK+ +   ++P +Y  DL F +  L +  + V EY     +     
Sbjct: 113 RARNEEPMVDTWTEMKKIMRKRYVPASYSRDLKFKLQKLTQGNKGVEEYFKEMDVLMIQA 172

Query: 441 XXXXXEQIKLGQYIQGLSKPIHQALRFTPISTLSDAFYYAMEAETLPSQGAIA------- 283
                E++ + +++ GL+  IH  +       + D  + A++ E    +  +A       
Sbjct: 173 NIEEDEEVTMARFLNGLTNDIHDIVELQEFVEMDDLLHKAIQVEQQLKRKGVAKRSFTNF 232

Query: 282 ------------CAVSVAASKPM-----------ELKHVENKNCYICQESGHVANQCPKK 172
                        A + ++S P+             K   +  C+ CQ  GH A +CP K
Sbjct: 233 GSSSWKDKGKKDGAATSSSSTPIPSKTRSKSQEEPSKRSRDVKCFKCQGLGHYAYECPNK 292

Query: 171 KRHTL 157
           +   L
Sbjct: 293 RSMVL 297


>ref|XP_002323677.1| predicted protein [Populus trichocarpa] gi|222868307|gb|EEF05438.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 31/243 (12%)
 Frame = -3

Query: 807 YDVKLDVLSFTGSKNPNLSIDWIEKIETIFSLKGFDDPMCVMLVET*LEGYALHWWKIYQ 628
           Y + +++ +F G++N +    WI+++ET F +    +   + +V   L G A  +WK  +
Sbjct: 125 YKLNVEMPTFKGTQNVDEFFSWIDEVETGFGVMDCSEDRKLKVVANKLRGSAAAYWKYLK 184

Query: 627 KNRQLQGYPRTTSWTSMKRDLLPEFLPPTYE*DLSFMVMNLVKCFEVV*EYMDGFYMXXX 448
             R L G P   +W  MK   + +FLPP YE  L   + N  +    V EY+D F     
Sbjct: 185 NKRVLDGKPPIATWEKMKSKFMSKFLPPDYEQRLYVQLQNCKQGNRTVEEYIDEFIRLNS 244

Query: 447 XXXXXXXEQIKLGQYIQGLSKPIHQALRFTPISTLSDAFYYAMEAE-------------- 310
                  E +++ ++  GL + I   ++     TL  AF  A +AE              
Sbjct: 245 RNLLPDNENMQIARFRGGLKQDIQDQMKMLNTFTLGQAFDLARKAEEPIRAPSVRPRFTN 304

Query: 309 -------------TLPSQGAIACAVSVAASKPMELKHVENKN----CYICQESGHVANQC 181
                        T PS G +A       + P +  +   +     CY C +SGH +NQC
Sbjct: 305 QQYQAGPSRVTPTTEPSNGTVATENRPRRAAPQQAPNPYARPMPSLCYRCHQSGHRSNQC 364

Query: 180 PKK 172
           P++
Sbjct: 365 PQR 367


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 28/240 (11%)
 Frame = -3

Query: 804 DVKLDVLSFTGSKNPNLSIDWIEKIETIFSLKGFDDPMCVMLVET*LEGYALHWWKIYQK 625
           D+K+++  F GS NP   +DW   IE +F  KG+ D     +    L+GYA  W++  + 
Sbjct: 87  DLKVEIPDFHGSLNPEDLLDWFRTIERVFEFKGYSDGKAFKVAILKLKGYASLWYENLKN 146

Query: 624 NRQLQGYPRTTSWTSMKRDLLPEFLPPTYE*DLSFMVMNLVKCFEVV*EYMDGFYMXXXX 445
            R+  G     SW  +K+ L  +F+P  Y  D+   +  L +  + +  Y+  F      
Sbjct: 147 QRRRDGKEPIKSWLKLKKKLNEKFIPKEYTQDIFIKLTQLKQDQQPLESYLRDFEQLTLQ 206

Query: 444 XXXXXXEQIKLGQYIQGLSKPIHQALRFTPISTLSDAFYYAMEAETL------------- 304
                  + K+ ++++GL   I   +R   + +  +A   A+  E +             
Sbjct: 207 CELNEKPEQKIARFVEGLDTKIAHRVRMQQVWSFDEAVNLALRVEKMGKGKATTTKPTTK 266

Query: 303 ---------------PSQGAIACAVSVAASKPMELKHVENKNCYICQESGHVANQCPKKK 169
                          PSQ          A++  + K +  K CY CQ  GH A +CP K+
Sbjct: 267 PATFRPPTSFKINEPPSQNKTTILDKGKAAETSQKKTMPLKKCYQCQGYGHFAKECPTKR 326


>ref|XP_003537359.1| PREDICTED: uncharacterized protein LOC100786304 [Glycine max]
          Length = 1317

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 60/267 (22%), Positives = 111/267 (41%), Gaps = 30/267 (11%)
 Frame = -3

Query: 867  VVSNTMNLSELLRVIHHTSIYDVKLDVLSFTGSKNPNLSIDWIEKIETIFSLKGFDDPMC 688
            +++ T+ L +++++     I  +KL++  F G  +    ++W  KIE +FS   +++   
Sbjct: 390  LMNPTVVLPKMMQLKRQNRIDGIKLNIPPFKGKNDLEAYLEWEMKIEHVFSCNNYEEDQK 449

Query: 687  VMLVET*LEGYALHWWKIYQKNRQLQGYPRTTSWTSMKRDLLPEFLPPTYE*DLSFMVMN 508
            V L  T    YAL WW   QK R     P   +WT MK+ +   ++P +Y  DL F +  
Sbjct: 450  VKLAATEFSDYALVWWNKLQKERARNEEPMVDTWTEMKKIMRKRYVPASYSRDLKFKLQK 509

Query: 507  LVKCFEVV*EYMDGFYMXXXXXXXXXXEQIKLGQYIQGLSKPIHQALRFTPISTLSDAFY 328
            L +  + V EY     +          E++ + +++ GL+  I   +       + D  +
Sbjct: 510  LTQGNKGVEEYFKEMDVLMIQANIEEDEEVTMARFLNGLTNDIRDIVELQEFVEMDDLLH 569

Query: 327  YAMEAETLPSQGAIA-------------------CAVSVAASKPM-----------ELKH 238
             A++ E    +  +A                    A + ++S P+             K 
Sbjct: 570  KAIQVEQQLKRKGVAKRSFTNFGSSSWKDKGKKDGAATSSSSTPIPSKTRSKSQEEPSKK 629

Query: 237  VENKNCYICQESGHVANQCPKKKRHTL 157
              +  C+ CQ  GH A +CP K+   L
Sbjct: 630  SRDVKCFKCQGLGHYAYECPNKRSMVL 656


>ref|XP_003544056.1| PREDICTED: uncharacterized protein LOC100810263 [Glycine max]
          Length = 1150

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 57/245 (23%), Positives = 99/245 (40%), Gaps = 30/245 (12%)
 Frame = -3

Query: 801 VKLDVLSFTGSKNPNLSIDWIEKIETIFSLKGFDDPMCVMLVET*LEGYALHWWKIYQKN 622
           +KL++  F G  +P   ++W  KIE +FS   +++   V L  T    YAL WW   QK 
Sbjct: 53  IKLNIPPFKGKNDPEAYLEWEMKIEHVFSCNNYEEDQKVKLAATEFSDYALVWWNKLQKE 112

Query: 621 RQLQGYPRTTSWTSMKRDLLPEFLPPTYE*DLSFMVMNLVKCFEVV*EYMDGFYMXXXXX 442
           R     P   +WT MK+ +   ++P +Y  DL F +  L +  + V EY     +     
Sbjct: 113 RARNEEPMVDTWTEMKKIMRKRYVPASYSRDLKFKLQKLTQGNKGVEEYFKEMDVLMIQE 172

Query: 441 XXXXXEQIKLGQYIQGLSKPIHQALRFTPISTLSDAFYYAMEAETLPSQGAIA------- 283
                E++ + +++ GL+  I   +       + D  + A++ E    +  +A       
Sbjct: 173 NIEEDEEVTMARFLNGLTNDIRDIVELQEFVEMDDLLHKAIQVEQQLKRKGVAKRSFTNF 232

Query: 282 ------------CAVSVAASKPM-----------ELKHVENKNCYICQESGHVANQCPKK 172
                        A + ++S P+             K   +  C+ CQ  GH A + P K
Sbjct: 233 GSSSWKDKGKKDGAATSSSSTPIPSKTRSKSQEEPSKRSRDVKCFKCQGLGHYAYEFPNK 292

Query: 171 KRHTL 157
           +   L
Sbjct: 293 RSMVL 297


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