BLASTX nr result

ID: Cimicifuga21_contig00035493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035493
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38747.2| Polyprotein, putative [Solanum demissum]                58   9e-07
emb|CAN80284.1| hypothetical protein VITISV_035380 [Vitis vinifera]    57   1e-06
emb|CAN62074.1| hypothetical protein VITISV_001619 [Vitis vinifera]    55   4e-06
emb|CAN77834.1| hypothetical protein VITISV_024733 [Vitis vinifera]    55   6e-06
emb|CAN61219.1| hypothetical protein VITISV_021296 [Vitis vinifera]    55   8e-06

>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/72 (41%), Positives = 44/72 (61%)
 Frame = -3

Query: 216 EDMSLMKKMQNLVPPPAGPTATLADSGNPCLHTSTSAPWIIDSGASEHMTGNPSLFHSLK 37
           ++ + + K Q  +P P+     L +SGN CL  S+S+ WIIDSGA++HMTGNP  F   +
Sbjct: 333 DEYARLTKYQESMPAPS-----LNESGNKCL-ISSSSNWIIDSGATDHMTGNPKFFSKFQ 386

Query: 36  GSASPSFVTLAN 1
               PS VT+ +
Sbjct: 387 AHKVPSSVTIVD 398


>emb|CAN80284.1| hypothetical protein VITISV_035380 [Vitis vinifera]
          Length = 1228

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
 Frame = -3

Query: 201 MKKMQNLVPPPAGPTATLADSGNP--CL-HTSTSAPWIIDSGASEHMTGNPSLFHSLKGS 31
           M  +  + PP +   A++A +GN   CL HTS+  PWI+DSGAS+H++GN   F S+  +
Sbjct: 214 MMTISTIRPPKSASVASVAQTGNASACLTHTSSLGPWILDSGASDHISGNKDFFSSITTT 273

Query: 30  ASPSFVTLAN 1
           ++   VTL N
Sbjct: 274 SALPTVTLTN 283


>emb|CAN62074.1| hypothetical protein VITISV_001619 [Vitis vinifera]
          Length = 1237

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 40/103 (38%), Positives = 56/103 (54%)
 Frame = -3

Query: 309 ALPILETNFILR*SCIYIRCPR*RRSLQKLQEDMSLMKKMQNLVPPPAGPTATLADSGNP 130
           ALPI  +  ILR  C+ +R P   R L+ L   + L+  +  ++P PA PT  L      
Sbjct: 208 ALPIWPSPLILR--CLSLRAPPHLRHLRLL---LPLLPSL--VMPLPALPTHLL------ 254

Query: 129 CLHTSTSAPWIIDSGASEHMTGNPSLFHSLKGSASPSFVTLAN 1
                 S PWI+DSGAS+H++GN  LF S+  ++    VTLAN
Sbjct: 255 ------SGPWILDSGASDHLSGNKDLFSSITTTSDLPTVTLAN 291


>emb|CAN77834.1| hypothetical protein VITISV_024733 [Vitis vinifera]
          Length = 1300

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
 Frame = -3

Query: 168 AGPTATLADSGNP--CL-HTSTSAPWIIDSGASEHMTGNPSLFHSLKGSASPSFVTLAN 1
           A  +A++A +GN   CL HTS+  PWI+DSGAS+H++GN  LF S+  +++   VTLAN
Sbjct: 246 ATKSASVAQTGNASACLTHTSSLGPWILDSGASDHISGNKDLFSSITTTSTLPTVTLAN 304


>emb|CAN61219.1| hypothetical protein VITISV_021296 [Vitis vinifera]
          Length = 729

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
 Frame = -3

Query: 156 ATLADSGN--PCL-HTSTSAPWIIDSGASEHMTGNPSLFHSLKGSASPSFVTLAN 1
           A++A +GN   CL HTS+  PWI+DSGAS+H++GN  LF S+  +++   VTLAN
Sbjct: 139 ASIAQTGNVSACLTHTSSLGPWILDSGASDHISGNKDLFSSITTTSALPTVTLAN 193


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