BLASTX nr result

ID: Cimicifuga21_contig00035489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035489
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...    81   8e-14
emb|CBI38350.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]    72   4e-11

>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
           vinifera]
          Length = 652

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/96 (43%), Positives = 55/96 (57%)
 Frame = +1

Query: 1   EDSNETPSNRQKQTYTVLSXXXXXXXXXXXXXTISDVLSIPIIPATIXXXXXXXXXXXXQ 180
           +DS++  S+R +Q YT+L+              IS VLSIP + A+I             
Sbjct: 109 DDSDDLTSHRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVH 168

Query: 181 DEWFADEEGVRTTVGLLEKQMVHYPISKNLTCGICF 288
           DEWFADEE VR  VGLLEK +V +P ++ LTCGICF
Sbjct: 169 DEWFADEEKVRKAVGLLEKPVVQFPNARELTCGICF 204


>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/96 (43%), Positives = 55/96 (57%)
 Frame = +1

Query: 1   EDSNETPSNRQKQTYTVLSXXXXXXXXXXXXXTISDVLSIPIIPATIXXXXXXXXXXXXQ 180
           +DS++  S+R +Q YT+L+              IS VLSIP + A+I             
Sbjct: 38  DDSDDLTSHRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVH 97

Query: 181 DEWFADEEGVRTTVGLLEKQMVHYPISKNLTCGICF 288
           DEWFADEE VR  VGLLEK +V +P ++ LTCGICF
Sbjct: 98  DEWFADEEKVRKAVGLLEKPVVQFPNARELTCGICF 133


>ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|222852021|gb|EEE89568.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/96 (41%), Positives = 53/96 (55%)
 Frame = +1

Query: 1   EDSNETPSNRQKQTYTVLSXXXXXXXXXXXXXTISDVLSIPIIPATIXXXXXXXXXXXXQ 180
           +DS++  S+R +Q YT+LS              I+ VLSI  + ATI             
Sbjct: 48  DDSDDLISHRYQQNYTILSEGDIRQRQDDDIMRIATVLSISKVAATILLRYYNWSVSKVH 107

Query: 181 DEWFADEEGVRTTVGLLEKQMVHYPISKNLTCGICF 288
           DEWFADEE VR  VGLLE+ +V +P  + +TCGICF
Sbjct: 108 DEWFADEEKVRRAVGLLEEPVVPFPDGREMTCGICF 143


>ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|222864157|gb|EEF01288.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/96 (41%), Positives = 53/96 (55%)
 Frame = +1

Query: 1   EDSNETPSNRQKQTYTVLSXXXXXXXXXXXXXTISDVLSIPIIPATIXXXXXXXXXXXXQ 180
           +DS++  S+R +Q YTVLS              I+ VLSI  + A+I             
Sbjct: 48  DDSDDLISHRHQQNYTVLSEEDIRQRQDDDVMRIATVLSISKVAASILLRYYNWSVSKVH 107

Query: 181 DEWFADEEGVRTTVGLLEKQMVHYPISKNLTCGICF 288
           DEWFADEE VR  VGLLE+ +V +P  + +TCGICF
Sbjct: 108 DEWFADEEKVRKAVGLLEEPVVPFPDGREMTCGICF 143


>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
          Length = 588

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/84 (45%), Positives = 46/84 (54%)
 Frame = +1

Query: 37  QTYTVLSXXXXXXXXXXXXXTISDVLSIPIIPATIXXXXXXXXXXXXQDEWFADEEGVRT 216
           Q YT+L+              IS VLSIP + A+I             DEWFADEE VR 
Sbjct: 57  QNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRK 116

Query: 217 TVGLLEKQMVHYPISKNLTCGICF 288
            VGLLEK +V +P ++ LTCGICF
Sbjct: 117 AVGLLEKPVVQFPNARELTCGICF 140


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