BLASTX nr result

ID: Cimicifuga21_contig00035470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035470
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichoca...    88   8e-16
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...    88   8e-16
emb|CBI20163.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...    87   1e-15
gb|AFC90267.1| nucleotide-binding site leucine-rich repeat prote...    86   3e-15

>ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869825|gb|EEF06956.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 829

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 47/113 (41%), Positives = 71/113 (62%)
 Frame = +3

Query: 6   RLVGKTTALKSSKMVWEWLMDDDXXXXXXXXXXXXXXXXIVKDINNRLLEEQNRFGKVIW 185
           +LVG+ +  ++ +M+W WLM DD                +V  I+N+LL+  + F  V W
Sbjct: 93  KLVGQASD-RNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQRPSSFNYVFW 151

Query: 186 VTVSKDANVNKLQSDIAKALNLNLSDEQDEEKRSGLLVEAFVRRKGVVLILDD 344
           VTVS++  ++KLQ  IAKA+NL+LS+E+DE+KR+  L +A V +   VLILDD
Sbjct: 152 VTVSQNFTISKLQYLIAKAINLDLSNEEDEKKRAAKLSKALVAKGKSVLILDD 204


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1075

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 47/113 (41%), Positives = 71/113 (62%)
 Frame = +3

Query: 6   RLVGKTTALKSSKMVWEWLMDDDXXXXXXXXXXXXXXXXIVKDINNRLLEEQNRFGKVIW 185
           +LVG+ +  ++ +M+W WLM DD                +V  I+N+LL+  + F  V W
Sbjct: 224 KLVGQASD-RNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQRPSSFNYVFW 282

Query: 186 VTVSKDANVNKLQSDIAKALNLNLSDEQDEEKRSGLLVEAFVRRKGVVLILDD 344
           VTVS++  ++KLQ  IAKA+NL+LS+E+DE+KR+  L +A V +   VLILDD
Sbjct: 283 VTVSQNFTISKLQYLIAKAINLDLSNEEDEKKRAAKLSKALVAKGKSVLILDD 335


>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/113 (42%), Positives = 67/113 (59%)
 Frame = +3

Query: 6   RLVGKTTALKSSKMVWEWLMDDDXXXXXXXXXXXXXXXXIVKDINNRLLEEQNRFGKVIW 185
           +L+G+TT  ++ + +W  L   +                IV  I+N LLE+++ FG V W
Sbjct: 142 QLIGETTTKRNLEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIHNLLLEKKDTFGLVYW 201

Query: 186 VTVSKDANVNKLQSDIAKALNLNLSDEQDEEKRSGLLVEAFVRRKGVVLILDD 344
           VTVSKD++V KLQ  IA+ +NL+LS E+DE  RS LL EA  + K  VLI DD
Sbjct: 202 VTVSKDSSVRKLQDVIAEKINLDLSKEEDERLRSALLFEALQKEKKFVLIFDD 254


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Vitis vinifera]
          Length = 1016

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/113 (42%), Positives = 67/113 (59%)
 Frame = +3

Query: 6   RLVGKTTALKSSKMVWEWLMDDDXXXXXXXXXXXXXXXXIVKDINNRLLEEQNRFGKVIW 185
           +L+G+TT  ++ + +W  L   +                IV  I+N LLE+++ FG V W
Sbjct: 142 QLIGETTTKRNLEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIHNLLLEKKDTFGLVYW 201

Query: 186 VTVSKDANVNKLQSDIAKALNLNLSDEQDEEKRSGLLVEAFVRRKGVVLILDD 344
           VTVSKD++V KLQ  IA+ +NL+LS E+DE  RS LL EA  + K  VLI DD
Sbjct: 202 VTVSKDSSVRKLQDVIAEKINLDLSKEEDERLRSALLFEALQKEKKFVLIFDD 254


>gb|AFC90267.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron kanehirai]
          Length = 299

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/74 (56%), Positives = 58/74 (78%)
 Frame = +3

Query: 123 IVKDINNRLLEEQNRFGKVIWVTVSKDANVNKLQSDIAKALNLNLSDEQDEEKRSGLLVE 302
           I+K I+NRLL+E+++F  V WVT+SK+ NV KLQSDIAK LN +LSD+QD+ +R+  L E
Sbjct: 8   IMKQIHNRLLKEKDKFDGVFWVTISKEFNVLKLQSDIAKELNFSLSDDQDKRRRASQLYE 67

Query: 303 AFVRRKGVVLILDD 344
           A  ++K  VLI+DD
Sbjct: 68  ALSQQKRYVLIIDD 81


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