BLASTX nr result

ID: Cimicifuga21_contig00035468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035468
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465395.1| hypothetical protein SORBIDRAFT_01g037880 [S...    56   5e-06

>ref|XP_002465395.1| hypothetical protein SORBIDRAFT_01g037880 [Sorghum bicolor]
           gi|241919249|gb|EER92393.1| hypothetical protein
           SORBIDRAFT_01g037880 [Sorghum bicolor]
          Length = 398

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 12/190 (6%)
 Frame = +2

Query: 83  LILYGSFHGFLLLKNRLGPSALFLWNPTTKEQVTVASPNLQHTVCGFYFHPTSREHRVLF 262
           L L+GS  G LLL +      LFL NPTT+    +   +  HT+ G Y H  S ++RVL+
Sbjct: 118 LALHGSCDGVLLLSSDYH---LFLCNPTTRHWGRLPPLHRDHTIAGLYSHRISDDYRVLY 174

Query: 263 --QCPQGNHFEFIVLSLETKLSRKLVSSSRYPLFD--------QTNPIILDGILYWKVDS 412
             +   GN++ +++ +   K  ++LVS    P+           T P++L G L+W   S
Sbjct: 175 FRRHGDGNYYYYVMAAGTRK--QRLVSRQVSPIHSSWHTWFARHTPPVLLHGNLHWPPVS 232

Query: 413 NRTYGEMHKYLNLFTVPCSSSIMSFNMDTEQFSTMPHPGFDPALEPYWCEWKENNH--HQ 586
           +R                  SI  F+   E F  MP P  +            NN     
Sbjct: 233 SR----------------PESIAVFDTVAEVFRLMPSPAVN-----------VNNQLVSN 265

Query: 587 VKIMEVEGHL 616
           VK++++EG L
Sbjct: 266 VKLLDMEGAL 275


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