BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035464
         (1882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   166   2e-38
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...   144   8e-32
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...   142   4e-31
ref|NP_197659.1| F-box/FBD/LRR-repeat protein [Arabidopsis thali...   139   2e-30
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-29

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  166 bits (420), Expect = 2e-38
 Identities = 168/504 (33%), Positives = 241/504 (47%), Gaps = 18/504 (3%)
 Frame = -3

Query: 1631 GTNTMDVEDRISSLPDDVLHRILSFLDMKYVLQTCILSKRWTAVWSSLPFLNFNYHIF-- 1458
            G+   +  D IS+LPD++L  ILSFL  K+ + T ILSKRW  +W+S+P L+F+  ++  
Sbjct: 2    GSEYEESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLN 61

Query: 1457 EDTCDDYDE----FMDFVYKVLFIRDSSDIHTLRLCYSPTNMD---AWIHTIIRRNIRIL 1299
              T  + +E    F +FV  VL   + S I   RL Y   N+D   +WI   + R ++ L
Sbjct: 62   PSTLVELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDSVYSWICIALERRVQEL 121

Query: 1298 DVKFKSKYSIFDLPRFLFTCKSLVTLKLDIELDLTYDWEDGERVIFVNPPESVNLPSLKT 1119
            D+     + + +LP   F CK+LV +KL   L             F++ P +V LPSLK 
Sbjct: 122  DLHLLIDWRV-ELPPMFFICKTLVVVKLSCAL-------------FLDIPTTVWLPSLKA 167

Query: 1118 LHLQSFCFHDSELIQKLLLGCPVLDTLSIINCALHQRDVFTVQASLTICASQLKHLEIDG 939
            LHL+S  + D + IQKLL GCPVL+ L I      +R+    Q  + +    LK L I  
Sbjct: 168  LHLKSVEYSDDDSIQKLLSGCPVLEELVI------EREERDNQWVVNVSNPSLKILRI-- 219

Query: 938  IHGCDGFCGMYGYDEERQSLQKNCKITIFAPMLTSFKCRXXXXXXXXXXXXXXLVMADID 759
                DGF   + Y++E Q    + K+ + AP L                    LV A ID
Sbjct: 220  FFFTDGFA--HPYEQEDQ----DYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFID 273

Query: 758  PNVRNSSNDLEKDLVSHSNQMEEFGRNVMKLLGGLSNAKSLTLSAWPLEVISRAF-EIQP 582
              V   S + E+    H+  +   G  + +LLG +SN K L+L+   L+ +S    + + 
Sbjct: 274  --VEQDSEEFEES--PHNGGISYHG-PIYELLGRISNVKCLSLTGVTLDSLSGTIGDYKL 328

Query: 581  TTFDFLRHLKLKTL--FSRDSIKAIHYLLENSFNLETLVVEITKVEVESTVIGELPEPEF 408
             TF  +  L+   +  F+ D +      L +S NLE LV+E T    E    G L  P  
Sbjct: 329  PTFHNMTRLEFLFIGGFNWDFLP---NFLHSSPNLEALVIE-TGYTNELIPEGWL-MPLQ 383

Query: 407  VSESRFRHLKFVEIRNIQGSKNELECLRLLLKNAITLEKLSIFTCKEHSPYRDKRLRKFC 228
            V      HLK +EIR I G   ELE +  LLKNA  L++++I  C  H  Y D+     C
Sbjct: 384  VPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTI-DC--HESYMDQEF-CVC 439

Query: 227  KTLLTFLRAS------SSKKINVD 174
            K LL   R S      SSK I  D
Sbjct: 440  KKLLGLPRGSRSCFVVSSKGIETD 463


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
            gi|222873903|gb|EEF11034.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score =  144 bits (363), Expect = 8e-32
 Identities = 124/409 (30%), Positives = 197/409 (48%), Gaps = 23/409 (5%)
 Frame = -3

Query: 1610 EDRISSLPDDVLHRILSFLDMKYVLQTCILSKRWTAVWSSLPFLNFNYHIFEDTC----- 1446
            EDRIS+LP+ +LH ILSF+D   V+QTC+LSKRW  VW S P+L+FN+  F         
Sbjct: 34   EDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYY 93

Query: 1445 -DDYDEFMDFVYKVLFIRDS-----SDIHTLRLC-YSPTNMDAWIHTIIRRNIRILDVKF 1287
             DD + F DF+Y VL  R++       + T R C YS   +++ I+  ++ ++  + +  
Sbjct: 94   DDDMNNFTDFIYHVLVRRNNVKAFKLSLDTRRDCQYSV--VESLIYYAVKHHVEEISINT 151

Query: 1286 KSKYSIFDLPRFLFTCKSLVTLKLDIELDLTYDWEDGERVIFVNPPESVNLPSLKTLHLQ 1107
                    LPR  F C+SL +LKL ++  L               P+S+ L SLKTLHL 
Sbjct: 152  AHWDVPIVLPRCFFDCESLRSLKLKVDGGLAL-------------PKSLGLQSLKTLHLG 198

Query: 1106 SFCFHDSELIQKLLLGCPVLDTLSIINCALHQRDVFTVQASLTICASQLKHLEIDGIHGC 927
                 D     K+   CP L+ L+I +  L+  + F +       A  LK LEI      
Sbjct: 199  GAQNFDG----KIFSSCPNLENLTIEDICLNVIENFNIH------ALSLKSLEI------ 242

Query: 926  DGFCGMYGYDEERQSLQKNCKITIFAPMLTSFKCRXXXXXXXXXXXXXXLVMADIDPNVR 747
                     +     +++ CK+ + AP LTSFK                L   ++     
Sbjct: 243  --------LNWRYNRIKQGCKVMLVAPKLTSFKFDGNTPLFWSDVNLTSLDDVNVVLQRY 294

Query: 746  NSSND-----LEKDLVSHSNQMEE-FGRNVMKLLGGLSNAKSLTLSAWPLEVISR---AF 594
            + S++     +E + +S  ++ E+  G N++K+L    +AKSLTLS   +E++S    A 
Sbjct: 295  HHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILSEVPAAL 354

Query: 593  EIQPTTFDFLRHLKLKTLFSRDSIKA--IHYLLENSFNLETLVVEITKV 453
            +  P+ F  L++LKLKT     ++ A  ++Y L ++  L+    E  K+
Sbjct: 355  DKHPSPFSNLKYLKLKTDHKDVTLPAHVLNYFLRSASFLKAQTHEAVKL 403


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
            gi|222873902|gb|EEF11033.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score =  142 bits (357), Expect = 4e-31
 Identities = 123/412 (29%), Positives = 195/412 (47%), Gaps = 26/412 (6%)
 Frame = -3

Query: 1610 EDRISSLPDDVLHRILSFLDMKYVLQTCILSKRWTAVWSSLPFLNFNYHIFEDTC----- 1446
            EDRIS+LP+ +LH ILSF+D   V+QTC+LSKRW  VW S P+L+FN+  F         
Sbjct: 34   EDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYY 93

Query: 1445 -DDYDEFMDFVYKVLF-------IRDSSDIHTLRLCYSPTNMDAWIHTIIRRNIRILDVK 1290
             D+ + F DF+Y VL        ++ S DI     C   + +++ I+  ++ ++  + V 
Sbjct: 94   DDEVNNFTDFIYHVLVRRHNLKAVKISLDILRDTRC---SLVESLIYYAVKHHVEEISVN 150

Query: 1289 FKSKYSIFDLPRFLFTCKSLVTLKLDIELDLTYDWEDGERVIFVNPPESVNLPSLKTLHL 1110
                     LPR  F C+SL +LKL ++  +               P+S+ L SLKTLHL
Sbjct: 151  TAHWDMPIVLPRCFFDCESLRSLKLKVDGGIAL-------------PKSLGLQSLKTLHL 197

Query: 1109 QSFCFHDSELIQKLLLGCPVLDTLSIINCALHQRDVFTVQASLTICASQLKHLEIDGIHG 930
                  D     K+   CP L+ L I +  L+  + F +       A  LK LEI     
Sbjct: 198  GGARNFDG----KIFSTCPNLENLKIEDIYLNTIENFNIH------ALNLKSLEI----- 242

Query: 929  CDGFCGMYGYDEERQSLQKNCKITIFAPMLTSFKCRXXXXXXXXXXXXXXLVMADIDPNV 750
                   YG       + + CK+ +FAP LTSFK                  + D++  +
Sbjct: 243  ---LNWRYG------RIMRGCKVMLFAPKLTSFK--FYGNTPLFWSEVNLTSLDDVNVVL 291

Query: 749  RNSSND-------LEKDLVSHSNQMEE-FGRNVMKLLGGLSNAKSLTLSAWPLEVISR-- 600
            +   +        +E + +S  ++ E+  G N++K+L    +AKSLTLS   +E++S   
Sbjct: 292  QRYQHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILSEVP 351

Query: 599  -AFEIQPTTFDFLRHLKLKTLFSRDSIKA--IHYLLENSFNLETLVVEITKV 453
             A +  P+ F  L++LKLKT     ++ A  ++Y L ++  L+    E  K+
Sbjct: 352  AALDKHPSPFSNLKYLKLKTDHKDVTLPAHVLNYFLRSASFLKAQTHEAVKL 403


>ref|NP_197659.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
            gi|75262763|sp|Q9FNJ4.1|FDL32_ARATH RecName:
            Full=Putative F-box/FBD/LRR-repeat protein At5g22670
            gi|10178241|dbj|BAB11673.1| unnamed protein product
            [Arabidopsis thaliana] gi|332005679|gb|AED93062.1|
            F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 443

 Score =  139 bits (351), Expect = 2e-30
 Identities = 136/486 (27%), Positives = 221/486 (45%), Gaps = 6/486 (1%)
 Frame = -3

Query: 1610 EDRISSLPDDVLHRILSFLDMKYVLQTCILSKRWTAVWSSLPFLNFNYHIFEDTCDDYDE 1431
            +D IS LPDD+L RILS L  K  ++T +LSKRW     S+P L FN   F      Y E
Sbjct: 10   QDSISLLPDDLLCRILSNLPTKVAVRTSVLSKRWKRFSLSVPLLEFNVSEFH----GYYE 65

Query: 1430 FMDFVYKVLFIRDSSDIHTLRLCYSPTNMD-----AWIHTIIRRNIRILDVKFKSKYSIF 1266
            F   V+  L     + IH L+L +     D      WIH  ++R ++ LD+   S     
Sbjct: 66   FARVVHGFLDTSRETCIHKLKLAFEKKQHDRSYLTQWIHNAVKRKVQHLDIGRWSYLGQE 125

Query: 1265 DLPRFLFTCKSLVTLKLDIELDLTYDWEDGERVIFVNPPESVNLPSLKTLHLQSFCFHDS 1086
             +P  L+TC++LV+L+L                + +   + V+LP LKT+HL    + + 
Sbjct: 126  LIPHSLYTCETLVSLRL--------------HNVSLPDFDHVSLPRLKTMHLIDNIYPND 171

Query: 1085 ELIQKLLLGCPVLDTLSIINCALHQRDVFTVQASLTICASQLKHLEIDGIHGCDGFCGMY 906
             L++ L+  CPVL+ L++       RDV  +   L + +  LK L    I   DG    Y
Sbjct: 172  ALLENLISSCPVLEDLNV------SRDVENIVKVLRVRSLSLKSL----ILALDG--DRY 219

Query: 905  GYDEERQSLQKNCKITIFAPMLTSFKCRXXXXXXXXXXXXXXLVMADIDPNVRNSSNDLE 726
            G  E+      + ++ I AP L+    R                  DID       + L+
Sbjct: 220  GDIED-----DSWEVVIDAPRLSYLSLRDDQSKSFVLSSVTSPAKVDIDVTFDVVRSVLK 274

Query: 725  KDLVSHSNQMEEFGRNVMKLLGGLSNAKSLTLSAWPLEVISRAFEIQPTTFDFLRHLKLK 546
              L++ S     F R        LS+ + +T+S   L+V+SR    +P    F   ++  
Sbjct: 275  NFLLTRSVVRNFFTR--------LSSVRDMTMSGTTLKVLSRYMRHEPLP-QFPNMIQFY 325

Query: 545  TLFSRDSIKAIHYLLENSFNLETLVVEITKVEVESTVIGELPEPEFVSESRFRHLKFVEI 366
             +F    ++ +   LE+  NL++LV+E+   +    +I     P+ +  S    L+ VEI
Sbjct: 326  AVFCNSDLEKLPNFLESCPNLKSLVLELEVFKKNDLLILSSSIPKCLRSS----LEHVEI 381

Query: 365  RN-IQGSKNELECLRLLLKNAITLEKLSIFTCKEHSPYRDKRLRKFCKTLLTFLRASSSK 189
               I G++ E++ ++  L+N+  L+K   FT +      D+    F K LL F R S+S 
Sbjct: 382  HTPISGAEAEMKLVKYFLENSAVLKK---FTLQLGCKRMDEESIIF-KELLRFRRCSASC 437

Query: 188  KINVDI 171
            ++ V++
Sbjct: 438  EVVVEV 443


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  136 bits (342), Expect = 2e-29
 Identities = 122/394 (30%), Positives = 191/394 (48%), Gaps = 21/394 (5%)
 Frame = -3

Query: 1610 EDRISSLPDDVLHRILSFLDMKYVLQTCILSKRWTAVWSSLPFLNFNYHIFEDTCD-DYD 1434
            EDRIS+LP+ +LHRILSF+D   V+QTC+LSKRW  VW S P+L+FN+  F    + DY 
Sbjct: 15   EDRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYY 74

Query: 1433 E-----FMDFVYKVLFIRDSSDI--HTLRLCYSP--TNMDAWIHTIIRRNIRILDVKFKS 1281
            E     F DF+ +VL  R++      +L LC     + +++ I+  ++ +   + +    
Sbjct: 75   EDEMVNFTDFINQVLVRRNNFKAIKISLDLCGHTRYSLVESLIYYAVKHHAEEICIDTAC 134

Query: 1280 KYSIFDLPRFLFTCKSLVTLKLDIELDLTYDWEDGERVIFVNPPESVNLPSLKTLHLQSF 1101
            +     LPR  F C+SL +LKL I+  +               P+S+ LPSLKTLHL   
Sbjct: 135  RDVPIVLPRCFFNCESLRSLKLRIDGGIAL-------------PKSLGLPSLKTLHLGGA 181

Query: 1100 CFHDSELIQKLLLGCPVLDTLSIINCALHQRDVFTVQASLTICASQLKHLEIDGIHGCDG 921
               D     K+   CP L+ L+I +  L+  + F +       A  LK LEI        
Sbjct: 182  QNFDG----KIFSSCPNLENLTIEDICLNTIENFNIH------ALNLKSLEI-------- 223

Query: 920  FCGMYGYDEERQSLQKNCKITIFAPMLTSFKCRXXXXXXXXXXXXXXLVMADIDPNVRNS 741
                   +     + + CK+ +FAP LTSFK                L   ++       
Sbjct: 224  ------LNWRYSRIMRGCKVMLFAPKLTSFKFDGNTPLFWSEVNLTSLDDVNVVLQRYYY 277

Query: 740  SNDL-----EKDLVSHSNQMEE-FGRNVMKLLGGLSNAKSLTLSAWPLEVISR---AFEI 588
             +D      E + +S  ++ ++ F  +++K+L    +AKSLTLS   +EV+S+   A   
Sbjct: 278  RHDYQFYVDEDEYISGEDETKQGFCLDLLKMLHQFCSAKSLTLSMNIIEVLSKVPAALNK 337

Query: 587  QPTTFDFLRHLKLKTLFSRDSIKA--IHYLLENS 492
             P+ F  L++LKLKT     ++ A  ++Y L +S
Sbjct: 338  HPSPFSNLKYLKLKTDHKDVTLPAHVLNYFLSSS 371