BLASTX nr result

ID: Cimicifuga21_contig00035457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035457
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]        117   1e-24
emb|CBI35965.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_004146848.1| PREDICTED: uncharacterized protein LOC101211...   110   2e-22
ref|XP_002521393.1| conserved hypothetical protein [Ricinus comm...   103   1e-20
ref|XP_003597581.1| hypothetical protein MTR_2g099820 [Medicago ...   100   2e-19

>ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
          Length = 501

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/109 (53%), Positives = 72/109 (66%)
 Frame = +3

Query: 3   EIEGADGSKISIKTDSKTDFGRGLGFPFSDQAVSRRHILFELETDKNQNTPNSETRVYFE 182
           EIEG +G +  ++  SK +FGRG GFP +D+ VSR H+ FEL  D       SETRV F 
Sbjct: 2   EIEGKNGWRTELRKGSKKEFGRGSGFPTTDRTVSRHHVTFELHED-------SETRVRFV 54

Query: 183 VLGKNPVWVFCGANGNAKVFRRSDKGEMRVGDAFCVSSKKPILFKLKRS 329
           V+GKNP WV    +G  +VFRR  +GEM  GD+FCVSSK PI F LKR+
Sbjct: 55  VIGKNPFWVLSSGSGEIRVFRRHQRGEMESGDSFCVSSKNPIWFSLKRT 103


>emb|CBI35965.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/109 (53%), Positives = 72/109 (66%)
 Frame = +3

Query: 3   EIEGADGSKISIKTDSKTDFGRGLGFPFSDQAVSRRHILFELETDKNQNTPNSETRVYFE 182
           EIEG +G +  ++  SK +FGRG GFP +D+ VSR H+ FEL  D       SETRV F 
Sbjct: 28  EIEGKNGWRTELRKGSKKEFGRGSGFPTTDRTVSRHHVTFELHED-------SETRVRFV 80

Query: 183 VLGKNPVWVFCGANGNAKVFRRSDKGEMRVGDAFCVSSKKPILFKLKRS 329
           V+GKNP WV    +G  +VFRR  +GEM  GD+FCVSSK PI F LKR+
Sbjct: 81  VIGKNPFWVLSSGSGEIRVFRRHQRGEMESGDSFCVSSKNPIWFSLKRT 129


>ref|XP_004146848.1| PREDICTED: uncharacterized protein LOC101211610 [Cucumis sativus]
           gi|449476889|ref|XP_004154866.1| PREDICTED:
           uncharacterized LOC101211610 [Cucumis sativus]
          Length = 295

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/108 (48%), Positives = 73/108 (67%)
 Frame = +3

Query: 3   EIEGADGSKISIKTDSKTDFGRGLGFPFSDQAVSRRHILFELETDKNQNTPNSETRVYFE 182
           EI G DGSK+ ++ +  T FGRG GF   D+ +SRRHIL E +T +N N    E +V FE
Sbjct: 2   EITGEDGSKLVLR-EPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60

Query: 183 VLGKNPVWVFCGANGNAKVFRRSDKGEMRVGDAFCVSSKKPILFKLKR 326
           V+G+NP+WV    NG  + F+RS+KGEM  G++FCV  ++PI F+L +
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNK 108


>ref|XP_002521393.1| conserved hypothetical protein [Ricinus communis]
           gi|223539471|gb|EEF41061.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 297

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/111 (50%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
 Frame = +3

Query: 3   EIEGADGSKISIKTDS-KTDFGRGLGFPFSDQAVSRRHILFELETDKNQNTPNSETRVYF 179
           EIEG DGS+I +++D  +T FGRGLG+   D+ VSRRH+LF+  T+ NQ  P    RV F
Sbjct: 2   EIEGDDGSRIEVESDGFETVFGRGLGYNTKDRTVSRRHVLFK--TENNQTEP----RVSF 55

Query: 180 EVLGKNPVWVFCGANG--NAKVFRRSDKGEMRVGDAFCVSSKKPILFKLKR 326
           +V+GKNP+WV        + KVFR+ DKGE+  GD FC SS+ P+ F LK+
Sbjct: 56  QVIGKNPLWVRKSGESERDIKVFRKFDKGEVGAGDWFCTSSQNPVWFNLKK 106


>ref|XP_003597581.1| hypothetical protein MTR_2g099820 [Medicago truncatula]
           gi|355486629|gb|AES67832.1| hypothetical protein
           MTR_2g099820 [Medicago truncatula]
          Length = 303

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/109 (41%), Positives = 67/109 (61%)
 Frame = +3

Query: 3   EIEGADGSKISIKTDSKTDFGRGLGFPFSDQAVSRRHILFELETDKNQNTPNSETRVYFE 182
           E EG DGSK S+++  K  FGRG GF   D  VSRRH+ F+L  + +   P    +V F+
Sbjct: 2   EFEGEDGSKFSLQSSDKALFGRGCGFNTKDHTVSRRHVSFQLNNESDSEPP----KVSFQ 57

Query: 183 VLGKNPVWVFCGANGNAKVFRRSDKGEMRVGDAFCVSSKKPILFKLKRS 329
           V+G+NP+WV    +   K+F++ + G + +GD FC+S+K P  F L +S
Sbjct: 58  VIGRNPIWVLKNNDKTLKIFKKFEMGHLELGDRFCLSAKTPFWFNLNKS 106


Top