BLASTX nr result

ID: Cimicifuga21_contig00035418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035418
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31643.3| unnamed protein product [Vitis vinifera]              121   2e-25
ref|XP_002524204.1| DNA binding protein, putative [Ricinus commu...   109   6e-22
ref|XP_002521049.1| DNA binding protein, putative [Ricinus commu...   102   6e-20
ref|XP_003538417.1| PREDICTED: uncharacterized protein LOC100817...    97   4e-18
ref|XP_003552872.1| PREDICTED: uncharacterized protein LOC100806...    96   7e-18

>emb|CBI31643.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  121 bits (303), Expect = 2e-25
 Identities = 67/143 (46%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
 Frame = +2

Query: 2   PNLARLALRILSQTCSASVCRLSSAPFDQVHKTKNHLERQRLCDLVFVQYNLRLQQIYLG 181
           PNLARLA+R+LSQ CS+ V + +  PF+Q+H ++N LE QRL DLVFVQYNLRL QI + 
Sbjct: 128 PNLARLAIRVLSQPCSSIVNKRNQIPFEQMHDSRNCLEHQRLIDLVFVQYNLRLMQI-VQ 186

Query: 182 KNQEPGPMDPISTDTIDLTEDWVTGNPESFS--GDSDWVALHEPADNCMXXXXXXXXXXX 355
            N+E  P DPIS D+ ++ +DWV+G        G SDW+AL  P+ N M           
Sbjct: 187 MNREHDPRDPISFDSSNVVDDWVSGKEACLQDYGTSDWMALDPPSGNTMLLGPSNDEAED 246

Query: 356 XVAGFNYQERPNGVQGDEEDDVK 424
             AGF+  E  N V+  EED+++
Sbjct: 247 LGAGFDDDEIFNRVKDVEEDNIE 269


>ref|XP_002524204.1| DNA binding protein, putative [Ricinus communis]
            gi|223536481|gb|EEF38128.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 753

 Score =  109 bits (272), Expect = 6e-22
 Identities = 64/141 (45%), Positives = 87/141 (61%), Gaps = 2/141 (1%)
 Frame = +2

Query: 2    PNLARLALRILSQTCSASVCRLSSAPFDQVHKTKNHLERQRLCDLVFVQYNLRLQQIYLG 181
            PNLARLA+R+LSQ CS+   +L+    +Q+H TKN LERQRL DLVFVQYNLRL+Q+ +G
Sbjct: 615  PNLARLAIRVLSQPCSSFGYKLNHISLEQIHDTKNCLERQRLSDLVFVQYNLRLKQM-VG 673

Query: 182  KNQEPGPMDPISTDTIDLTEDWVTGNPESFS--GDSDWVALHEPADNCMXXXXXXXXXXX 355
            K++E   +DP+S D I + EDW+     S     +SDW+AL  P+ N             
Sbjct: 674  KSEEQDSVDPLSFDCISILEDWIKEKDISTEDYANSDWMALDPPSVNTRQPHDEVDELG- 732

Query: 356  XVAGFNYQERPNGVQGDEEDD 418
              AGF+  E  N V+  E+D+
Sbjct: 733  --AGFHDYEIFNRVKDTEDDN 751


>ref|XP_002521049.1| DNA binding protein, putative [Ricinus communis]
            gi|223539752|gb|EEF41333.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 854

 Score =  102 bits (255), Expect = 6e-20
 Identities = 55/110 (50%), Positives = 77/110 (70%), Gaps = 3/110 (2%)
 Frame = +2

Query: 2    PNLARLALRILSQTCSASVCRLSSAPFDQVHKTKNHLERQRLCDLVFVQYNLRLQQIYLG 181
            PNLARLALRILSQTCS+  CR +  PF++VH T+N LE++R  DLVFVQ NLRL+++ + 
Sbjct: 718  PNLARLALRILSQTCSSIGCRSNHIPFEKVHATRNCLEQKRRSDLVFVQCNLRLKEM-VD 776

Query: 182  KNQEPGPMDPISTDTIDLTEDWVTGNP---ESFSGDSDWVALHEPADNCM 322
            +++   P+DPIS D I + EDW+  N    E +   +DW++L  P+ N M
Sbjct: 777  ESKNQVPLDPISFDNISIVEDWILQNDICLEDYE-SADWMSLVPPSANNM 825


>ref|XP_003538417.1| PREDICTED: uncharacterized protein LOC100817502 [Glycine max]
          Length = 759

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
 Frame = +2

Query: 2   PNLARLALRILSQTCSASVCRLSSAPFDQVHKTKNHLERQRLCDLVFVQYNLRLQQIYLG 181
           PNL+RLA+RILSQT S   C+ +  PF+Q+  T+N++ERQ L DLVFV  NLRL+Q+++ 
Sbjct: 612 PNLSRLAIRILSQTSSVMSCKRNQIPFEQIINTRNYIERQHLTDLVFVHCNLRLRQMFMS 671

Query: 182 KNQEPGPMDPISTDTIDLTEDWVTGNP---ESFSGDSDWVALHEPADNCM 322
           K Q+    DP+S D I   E+W+       +   G+SDW+AL   + N M
Sbjct: 672 KEQDFS--DPLSFDNISNVEEWIRPRDLYIDDECGNSDWMALDPSSVNTM 719


>ref|XP_003552872.1| PREDICTED: uncharacterized protein LOC100806265 [Glycine max]
          Length = 758

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
 Frame = +2

Query: 2   PNLARLALRILSQTCSASVCRLSSAPFDQVHKTKNHLERQRLCDLVFVQYNLRLQQIYLG 181
           PNL+RLA+RILSQT S   C+ +  PF+Q+  T+N++ERQ L DLVFV  NLRL+Q+++ 
Sbjct: 611 PNLSRLAIRILSQTSSVMSCKRNQVPFEQIINTRNYIERQHLTDLVFVHCNLRLRQMFMS 670

Query: 182 KNQEPGPMDPISTDTIDLTEDWVTGNP---ESFSGDSDWVALHEPADNCM 322
           K Q     DP+S D +   E+W+       +   G+SDW+AL   + N M
Sbjct: 671 KEQNFS--DPLSFDNVSNVEEWIRPRDLYVDDECGNSDWMALDPSSVNTM 718


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