BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035378
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   153   2e-35
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   146   2e-33
ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   136   2e-30
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   136   2e-30

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/87 (85%), Positives = 81/87 (93%)
 Frame = +1

Query: 1   LELYKDPAIIVINKPPGMPVQGGIGIKNSLDVLAATSLKYDYTEPPRLVHRLDRDSSGIL 180
           LELYKDPAIIV+NKPPG+PVQGGIGIK SLD LAAT L+YD +EPPRLVHRLDRDSSGIL
Sbjct: 185 LELYKDPAIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDCSEPPRLVHRLDRDSSGIL 244

Query: 181 VLGRTQTSAAILHSIFREKTFGASTDD 261
           ++GRTQTSA ILHSIFREKTFGAS +D
Sbjct: 245 IMGRTQTSATILHSIFREKTFGASNND 271


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/87 (80%), Positives = 77/87 (88%)
 Frame = +1

Query: 1   LELYKDPAIIVINKPPGMPVQGGIGIKNSLDVLAATSLKYDYTEPPRLVHRLDRDSSGIL 180
           LELYKD AIIV+NKPPGMPVQGGIGIK+S D LAA+ L YDY+EPPRLVHRLDRDSSGIL
Sbjct: 246 LELYKDEAIIVVNKPPGMPVQGGIGIKSSFDELAASCLSYDYSEPPRLVHRLDRDSSGIL 305

Query: 181 VLGRTQTSAAILHSIFREKTFGASTDD 261
           V+GRTQTS  +LHS+FREKTF AS  D
Sbjct: 306 VMGRTQTSTMVLHSVFREKTFAASNHD 332


>ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|222850284|gb|EEE87831.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/87 (78%), Positives = 75/87 (86%)
 Frame = +1

Query: 1   LELYKDPAIIVINKPPGMPVQGGIGIKNSLDVLAATSLKYDYTEPPRLVHRLDRDSSGIL 180
           LELYKD AIIV+NKPPGMPVQGGIGIK SLD L+A+    DY+EPPRLVHRLDRD SGIL
Sbjct: 36  LELYKDAAIIVVNKPPGMPVQGGIGIKRSLDELSASCFSSDYSEPPRLVHRLDRDCSGIL 95

Query: 181 VLGRTQTSAAILHSIFREKTFGASTDD 261
           V+GRTQTSA +LH+IFREKT  AS DD
Sbjct: 96  VMGRTQTSATVLHAIFREKTLAASNDD 122


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/84 (76%), Positives = 75/84 (89%)
 Frame = +1

Query: 1   LELYKDPAIIVINKPPGMPVQGGIGIKNSLDVLAATSLKYDYTEPPRLVHRLDRDSSGIL 180
           L L+KDPAI+VINKPPG+PVQGGIG+K SLD LAA+ L Y Y+EPPRLVHRLDRDSSGIL
Sbjct: 186 LVLHKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGIL 245

Query: 181 VLGRTQTSAAILHSIFREKTFGAS 252
           ++GRT TS ++LHS+FREKTF AS
Sbjct: 246 IMGRTSTSTSLLHSVFREKTFEAS 269


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/84 (76%), Positives = 75/84 (89%)
 Frame = +1

Query: 1   LELYKDPAIIVINKPPGMPVQGGIGIKNSLDVLAATSLKYDYTEPPRLVHRLDRDSSGIL 180
           L L+KDPAI+VINKPPG+PVQGGIG+K SLD LAA+ L Y Y+EPPRLVHRLDRDSSGIL
Sbjct: 181 LVLHKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGIL 240

Query: 181 VLGRTQTSAAILHSIFREKTFGAS 252
           ++GRT TS ++LHS+FREKTF AS
Sbjct: 241 IMGRTSTSTSLLHSVFREKTFEAS 264