BLASTX nr result

ID: Cimicifuga21_contig00035374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035374
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18711.3| unnamed protein product [Vitis vinifera]               71   1e-10
emb|CAN69656.1| hypothetical protein VITISV_013005 [Vitis vinifera]    69   4e-10
ref|XP_002510986.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
ref|XP_003638589.1| Protein DYAD [Medicago truncatula] gi|355504...    57   2e-06
ref|XP_004172950.1| PREDICTED: protein DYAD-like, partial [Cucum...    55   5e-06

>emb|CBI18711.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = -1

Query: 334 QIPQIAEKNELNVLVRFPSTLSLRQYFSSMERRNELPARKYPDLDEQFVMGVKLGKEVLV 155
           ++  ++EK E NV VRFPS LS+R++F   +   E+  + YP LDE++ MG+ +  +VL 
Sbjct: 27  RVVMVSEKTEHNVSVRFPSRLSIREHFRD-KASGEVNGKMYPALDERWEMGLNIAGQVLP 85

Query: 154 RQILPPEFHEQGCFPSFWLLPSKVTE-ISTSVINSDLNGGASDK 26
           RQI   EF EQ   PSFW +    TE IS    + +L    S K
Sbjct: 86  RQIPTEEFSEQRNLPSFWSVQQLETEKISIPASDGELGDLTSKK 129


>emb|CAN69656.1| hypothetical protein VITISV_013005 [Vitis vinifera]
          Length = 766

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
 Frame = -1

Query: 334 QIPQIAEKNELNVLVRFPSTLSLRQYFSSMERRNELPARKYPDLDEQFVMGVKLGKEVLV 155
           ++  ++EK E NV VRFPS LS+ ++F   +   E+  + YP LDE++ MG+ +  +VL 
Sbjct: 94  RVVMVSEKTEHNVSVRFPSRLSIHEHFRD-KASGEVNGKMYPALDERWEMGLNIAGQVLP 152

Query: 154 RQILPPEFHEQGCFPSFWLLPSKVTE-ISTSVINSDLNGGASDK 26
           RQI   EF EQ   PSFW +    TE IS    + +L    S K
Sbjct: 153 RQIPTEEFSEQRNLPSFWSVQQLETEKISIPASDGELGDLTSKK 196


>ref|XP_002510986.1| conserved hypothetical protein [Ricinus communis]
           gi|223550101|gb|EEF51588.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 852

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/82 (36%), Positives = 49/82 (59%)
 Frame = -1

Query: 334 QIPQIAEKNELNVLVRFPSTLSLRQYFSSMERRNELPARKYPDLDEQFVMGVKLGKEVLV 155
           +I  + EK  + V +RFPS  SLR YF+    ++++  +K P LDE+F+MG ++  + L 
Sbjct: 57  RIVMVFEKTRMRVSLRFPSIYSLRAYFNETSTKSDI--KKLPPLDEKFIMGSEIAADALY 114

Query: 154 RQILPPEFHEQGCFPSFWLLPS 89
           R+I P E  ++     FW +PS
Sbjct: 115 RRIPPQEITDKKNLWRFWAVPS 136


>ref|XP_003638589.1| Protein DYAD [Medicago truncatula] gi|355504524|gb|AES85727.1|
           Protein DYAD [Medicago truncatula]
          Length = 702

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
 Frame = -1

Query: 343 KTTQIPQIAEKNELNVLVRFPSTLSLRQYFSSMERRNELPARKYPDLDEQFVMGVKLGKE 164
           K   +  +++K E  V +R+PS  SL  +F+  +   +   +K P LDE++VMG++   +
Sbjct: 64  KCVNLVMVSDKGEQKVSLRYPSLKSLSTHFND-QSFGKPEGKKIPTLDEKYVMGIEFAIK 122

Query: 163 VLVRQILPPEFHEQGCFPSFWLLPSK---VTEISTSVI 59
            L R I   EF E+G   SFW  P K   + + +TS++
Sbjct: 123 TLCRSISANEFAEKGNSWSFWASPPKSPVINDAATSLV 160


>ref|XP_004172950.1| PREDICTED: protein DYAD-like, partial [Cucumis sativus]
          Length = 506

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
 Frame = -1

Query: 343 KTTQIPQIAEKNELNVLVRFPSTLSLRQYFSSMERRNELPARKYPDLDEQFVMGVKLGKE 164
           +  ++  ++EK+E+NV +R+PS  SLR +F +    NE   +  P L+E+++M   +  +
Sbjct: 82  RAIRVVMVSEKDEVNVSLRYPSVYSLRTHFRNCNNPNE---KGLPGLNEKYIMSSNIAGD 138

Query: 163 VLVRQILPPEFHEQGCFPSFWLLPSKVTEIS-TSVINSDLNGGASDKDV 20
            L R+I   E        SFW+ PS+ TE   +S    ++N   S K +
Sbjct: 139 ALYRRIETAEIANGRNSWSFWIGPSENTERDRSSGSGGEVNNAVSKKGI 187


Top