BLASTX nr result

ID: Cimicifuga21_contig00035358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035358
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283010.2| PREDICTED: LOW QUALITY PROTEIN: probably ina...   101   4e-23
ref|XP_004144659.1| PREDICTED: probably inactive leucine-rich re...    96   4e-21
ref|XP_002526749.1| Receptor protein kinase CLAVATA1 precursor, ...    95   8e-21
ref|XP_002330987.1| predicted protein [Populus trichocarpa] gi|2...    95   3e-20
ref|XP_002323303.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-19

>ref|XP_002283010.2| PREDICTED: LOW QUALITY PROTEIN: probably inactive leucine-rich
           repeat receptor-like protein kinase At5g06940-like
           [Vitis vinifera]
          Length = 887

 Score =  101 bits (252), Expect(2) = 4e-23
 Identities = 57/96 (59%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
 Frame = -3

Query: 320 ETEILVNFKTSIVDPMXXXXXXXXXXXTHLCNWXXXXXXXXXXXS---LNLQGLNLSGEV 150
           E EIL+ FK SI DPM           TH CNW           S   LNLQ LNLSGE+
Sbjct: 26  EAEILLTFKASIEDPMKYLSTWSNTSETHHCNWTGVTCTTTPPLSVTSLNLQSLNLSGEI 85

Query: 149 SPSICQLPNLSHLSLADNLFNQPIPLHLSQCSSLET 42
           S S+C L NLS+L+LADNLFNQPIPLHLSQCSSLET
Sbjct: 86  SASLCGLHNLSYLNLADNLFNQPIPLHLSQCSSLET 121



 Score = 31.2 bits (69), Expect(2) = 4e-23
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 51  LGNLNLSYNLIWGTIPE 1
           L  LNLS NLIWGT+PE
Sbjct: 119 LETLNLSNNLIWGTVPE 135


>ref|XP_004144659.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase At5g06940-like [Cucumis sativus]
           gi|449517277|ref|XP_004165672.1| PREDICTED: probably
           inactive leucine-rich repeat receptor-like protein
           kinase At5g06940-like [Cucumis sativus]
          Length = 889

 Score = 95.9 bits (237), Expect(2) = 4e-21
 Identities = 56/120 (46%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
 Frame = -3

Query: 383 FKPPXXXXXXXXXXXXXXXLQETEILVNFKTSIVDPMXXXXXXXXXXXTHLCNWXXXXXX 204
           FKPP                 E   L+ FK SI D             TH CNW      
Sbjct: 5   FKPPFLLSLAFAFFILGYSSSEEPTLLTFKASIKDSTNSLSNWVSSSQTHFCNWTGIACV 64

Query: 203 XXXXXSL------NLQGLNLSGEVSPSICQLPNLSHLSLADNLFNQPIPLHLSQCSSLET 42
                SL      +LQGLNLSGE+S SIC+LP L+HL+LADN FNQPIPLHLSQC SLET
Sbjct: 65  TSSSPSLLSVSAIDLQGLNLSGEISSSICELPRLAHLNLADNRFNQPIPLHLSQCRSLET 124



 Score = 30.4 bits (67), Expect(2) = 4e-21
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 51  LGNLNLSYNLIWGTIPE 1
           L  LNLS NLIWGTIP+
Sbjct: 122 LETLNLSNNLIWGTIPD 138


>ref|XP_002526749.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
           communis] gi|223533938|gb|EEF35663.1| Receptor protein
           kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 891

 Score = 95.1 bits (235), Expect(2) = 8e-21
 Identities = 52/97 (53%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
 Frame = -3

Query: 320 ETEILVNFKTSIVDPMXXXXXXXXXXXTHLCNWXXXXXXXXXXXS----LNLQGLNLSGE 153
           E +ILV+FK SI DP             H CNW                LNLQ LNLSGE
Sbjct: 30  EADILVSFKASIQDPKNALSSWSSGSNVHHCNWTGVTCSSTPSLVTVTSLNLQSLNLSGE 89

Query: 152 VSPSICQLPNLSHLSLADNLFNQPIPLHLSQCSSLET 42
           +S +ICQL NL+ L+LADNLFNQPIPLHLS+CSSL T
Sbjct: 90  ISSTICQLANLTVLNLADNLFNQPIPLHLSECSSLVT 126



 Score = 30.0 bits (66), Expect(2) = 8e-21
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 51  LGNLNLSYNLIWGTIPE 1
           L  LNLS NLIWGTIP+
Sbjct: 124 LVTLNLSNNLIWGTIPD 140


>ref|XP_002330987.1| predicted protein [Populus trichocarpa] gi|222872917|gb|EEF10048.1|
           predicted protein [Populus trichocarpa]
          Length = 883

 Score = 94.7 bits (234), Expect(2) = 3e-20
 Identities = 50/96 (52%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
 Frame = -3

Query: 320 ETEILVNFKTSIVDPMXXXXXXXXXXXTHLCNWXXXXXXXXXXXSL---NLQGLNLSGEV 150
           E ++L++FK SI DP             H CNW           +L   NLQ LNLSGE+
Sbjct: 27  EADVLLSFKGSIQDPKNTLSSWSSNSTVHYCNWTGITCTTSPPLTLTSLNLQSLNLSGEI 86

Query: 149 SPSICQLPNLSHLSLADNLFNQPIPLHLSQCSSLET 42
           S SIC+L NL+ L+LADN FNQPIPLHLSQCSSLE+
Sbjct: 87  SSSICELTNLALLNLADNFFNQPIPLHLSQCSSLES 122



 Score = 28.5 bits (62), Expect(2) = 3e-20
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -2

Query: 51  LGNLNLSYNLIWGTIPE 1
           L +LNLS NLIWG IP+
Sbjct: 120 LESLNLSNNLIWGPIPD 136


>ref|XP_002323303.1| predicted protein [Populus trichocarpa] gi|222867933|gb|EEF05064.1|
           predicted protein [Populus trichocarpa]
          Length = 887

 Score = 93.6 bits (231), Expect(2) = 1e-19
 Identities = 51/96 (53%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
 Frame = -3

Query: 320 ETEILVNFKTSIVDPMXXXXXXXXXXXTHLCNWXXXXXXXXXXXS---LNLQGLNLSGEV 150
           E +IL++FK SI DP             H CNW           +   LNLQ LNLSGE+
Sbjct: 28  EADILLSFKDSIQDPKNSLSSWSNSSNAHHCNWTGITCSTSPSLTVTSLNLQNLNLSGEI 87

Query: 149 SPSICQLPNLSHLSLADNLFNQPIPLHLSQCSSLET 42
           S SIC L NL  L+LADN FNQPIPLHLSQCSSLE+
Sbjct: 88  SSSICDLTNLGLLNLADNFFNQPIPLHLSQCSSLES 123



 Score = 27.3 bits (59), Expect(2) = 1e-19
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -2

Query: 51  LGNLNLSYNLIWGTIPE 1
           L +LN+S NLIWG IP+
Sbjct: 121 LESLNVSNNLIWGPIPD 137


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