BLASTX nr result

ID: Cimicifuga21_contig00035291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035291
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15034.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002279622.1| PREDICTED: dof zinc finger protein DOF5.6 [V...   102   2e-20
ref|XP_003523081.1| PREDICTED: dof zinc finger protein DOF5.6 [G...   102   4e-20
gb|ABI16015.1| Dof14, partial [Glycine max]                           102   4e-20
ref|XP_002318052.1| f-box family protein [Populus trichocarpa] g...    99   3e-19

>emb|CBI15034.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/71 (71%), Positives = 59/71 (83%), Gaps = 5/71 (7%)
 Frame = -3

Query: 199 MGLTSLR----ASDWLQGMNHEENGIDSSSSPSEDMMTCSKPL-EKKLRPQTDQAIKCPR 35
           MGLT L     +S+WLQG  HEENG+DSSS PS DM+TCS+PL E++LRPQ DQA+KCPR
Sbjct: 1   MGLTFLPVCMDSSEWLQGTAHEENGMDSSS-PSGDMLTCSRPLIERRLRPQHDQALKCPR 59

Query: 34  CDSTHTKFCYY 2
           CDSTHTKFCYY
Sbjct: 60  CDSTHTKFCYY 70


>ref|XP_002279622.1| PREDICTED: dof zinc finger protein DOF5.6 [Vitis vinifera]
          Length = 308

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/71 (71%), Positives = 59/71 (83%), Gaps = 5/71 (7%)
 Frame = -3

Query: 199 MGLTSLR----ASDWLQGMNHEENGIDSSSSPSEDMMTCSKPL-EKKLRPQTDQAIKCPR 35
           MGLT L     +S+WLQG  HEENG+DSSS PS DM+TCS+PL E++LRPQ DQA+KCPR
Sbjct: 1   MGLTFLPVCMDSSEWLQGTAHEENGMDSSS-PSGDMLTCSRPLIERRLRPQHDQALKCPR 59

Query: 34  CDSTHTKFCYY 2
           CDSTHTKFCYY
Sbjct: 60  CDSTHTKFCYY 70


>ref|XP_003523081.1| PREDICTED: dof zinc finger protein DOF5.6 [Glycine max]
          Length = 344

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/72 (66%), Positives = 58/72 (80%), Gaps = 6/72 (8%)
 Frame = -3

Query: 199 MGLTSLR-----ASDWLQGMNHEENGIDSSSSPSEDMMTCSKPL-EKKLRPQTDQAIKCP 38
           MGL+SL      +  WLQG  HEE+G+DSSSSPS DM+TCS+P+ E++LRP  DQA+KCP
Sbjct: 1   MGLSSLHVCMDSSDHWLQGTIHEESGMDSSSSPSGDMLTCSRPMIERRLRPPHDQALKCP 60

Query: 37  RCDSTHTKFCYY 2
           RCDSTHTKFCYY
Sbjct: 61  RCDSTHTKFCYY 72


>gb|ABI16015.1| Dof14, partial [Glycine max]
          Length = 174

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/72 (66%), Positives = 58/72 (80%), Gaps = 6/72 (8%)
 Frame = -3

Query: 199 MGLTSLR-----ASDWLQGMNHEENGIDSSSSPSEDMMTCSKPL-EKKLRPQTDQAIKCP 38
           MGL+SL      +  WLQG  HEE+G+DSSSSPS DM+TCS+P+ E++LRP  DQA+KCP
Sbjct: 1   MGLSSLHVCMDSSDHWLQGTIHEESGMDSSSSPSGDMLTCSRPMIERRLRPPHDQALKCP 60

Query: 37  RCDSTHTKFCYY 2
           RCDSTHTKFCYY
Sbjct: 61  RCDSTHTKFCYY 72


>ref|XP_002318052.1| f-box family protein [Populus trichocarpa]
           gi|222858725|gb|EEE96272.1| f-box family protein
           [Populus trichocarpa]
          Length = 312

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/71 (69%), Positives = 60/71 (84%), Gaps = 5/71 (7%)
 Frame = -3

Query: 199 MGLTSLR----ASDWLQGMNHEENGIDSSSSPSEDMMTCSKPL-EKKLRPQTDQAIKCPR 35
           MGLTSL+    +SDWLQG  ++E+G+DSSS PS DM+TCS+PL E++LRP  DQA+KCPR
Sbjct: 1   MGLTSLQVCMDSSDWLQGTINDESGMDSSS-PSGDMLTCSRPLIERRLRPPHDQALKCPR 59

Query: 34  CDSTHTKFCYY 2
           CDSTHTKFCYY
Sbjct: 60  CDSTHTKFCYY 70


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