BLASTX nr result

ID: Cimicifuga21_contig00035267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035267
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147461.1| PREDICTED: probable auxin efflux carrier com...    78   7e-13
ref|NP_001234211.1| auxin efflux facilitator SlPIN8 [Solanum lyc...    77   2e-12
ref|XP_002282480.1| PREDICTED: auxin efflux carrier component 1 ...    74   1e-11
ref|XP_002305371.1| auxin efflux carrier component [Populus tric...    71   8e-11
ref|NP_197014.1| putative auxin efflux carrier component 5 [Arab...    71   1e-10

>ref|XP_004147461.1| PREDICTED: probable auxin efflux carrier component 1b-like [Cucumis
           sativus] gi|449523229|ref|XP_004168626.1| PREDICTED:
           probable auxin efflux carrier component 1b-like [Cucumis
           sativus]
          Length = 357

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 45/95 (47%), Positives = 54/95 (56%)
 Frame = -2

Query: 286 RWGLKLPIIVDKSISILADGGLGMAMFSLGTNKESAITHNYLD*KRRTASRLVLI*VCHL 107
           RWG+KLP ++D+SISIL+ GGLGMAMFSL                               
Sbjct: 229 RWGVKLPEVIDRSISILSTGGLGMAMFSL------------------------------- 257

Query: 106 IGLFMASQASILACGTWSTILVMVAKFLVGPALMA 2
            GLFM S+ SI+ACGT  T++ M  KFLVGPALMA
Sbjct: 258 -GLFMGSRTSIIACGTKMTLVAMGMKFLVGPALMA 291


>ref|NP_001234211.1| auxin efflux facilitator SlPIN8 [Solanum lycopersicum]
           gi|312983238|gb|ADR30415.1| auxin efflux facilitator
           SlPIN8 [Solanum lycopersicum]
          Length = 357

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/95 (47%), Positives = 53/95 (55%)
 Frame = -2

Query: 286 RWGLKLPIIVDKSISILADGGLGMAMFSLGTNKESAITHNYLD*KRRTASRLVLI*VCHL 107
           RWG+ LP IV++SISIL+DGGLGMAMFS                                
Sbjct: 229 RWGVNLPKIVEQSISILSDGGLGMAMFS-------------------------------- 256

Query: 106 IGLFMASQASILACGTWSTILVMVAKFLVGPALMA 2
           IG+FMASQ SI+ACGT   IL M  KF++GP LMA
Sbjct: 257 IGVFMASQDSIIACGTKKAILAMALKFVLGPVLMA 291


>ref|XP_002282480.1| PREDICTED: auxin efflux carrier component 1 [Vitis vinifera]
           gi|147866288|emb|CAN79928.1| hypothetical protein
           VITISV_042448 [Vitis vinifera]
           gi|296082857|emb|CBI22158.3| unnamed protein product
           [Vitis vinifera]
          Length = 357

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 45/95 (47%), Positives = 52/95 (54%)
 Frame = -2

Query: 286 RWGLKLPIIVDKSISILADGGLGMAMFSLGTNKESAITHNYLD*KRRTASRLVLI*VCHL 107
           RW +KLP +VD SISIL+ GGLGMAMFSL                               
Sbjct: 229 RWNVKLPGVVDDSISILSKGGLGMAMFSL------------------------------- 257

Query: 106 IGLFMASQASILACGTWSTILVMVAKFLVGPALMA 2
            GLFMAS+ SI+ACGT   +L M  KFLVGPA+MA
Sbjct: 258 -GLFMASRPSIIACGTRLAVLAMGMKFLVGPAIMA 291


>ref|XP_002305371.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222848335|gb|EEE85882.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 355

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/95 (44%), Positives = 51/95 (53%)
 Frame = -2

Query: 286 RWGLKLPIIVDKSISILADGGLGMAMFSLGTNKESAITHNYLD*KRRTASRLVLI*VCHL 107
           RWG+ LP IVDKS+ IL+ GGLGMAMFSL                               
Sbjct: 227 RWGVNLPDIVDKSVRILSTGGLGMAMFSL------------------------------- 255

Query: 106 IGLFMASQASILACGTWSTILVMVAKFLVGPALMA 2
            GLFMAS+ SI+ACG    ++ M  KF+VGPAL+A
Sbjct: 256 -GLFMASRPSIIACGIRMAMVAMAMKFIVGPALIA 289


>ref|NP_197014.1| putative auxin efflux carrier component 5 [Arabidopsis thaliana]
           gi|42558885|sp|Q9LFP6.1|PIN5_ARATH RecName:
           Full=Putative auxin efflux carrier component 5;
           Short=AtPIN5 gi|9755677|emb|CAC01829.1| auxin transport
           protein-like [Arabidopsis thaliana]
           gi|332004734|gb|AED92117.1| putative auxin efflux
           carrier component 5 [Arabidopsis thaliana]
          Length = 367

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/94 (44%), Positives = 52/94 (55%)
 Frame = -2

Query: 286 RWGLKLPIIVDKSISILADGGLGMAMFSLGTNKESAITHNYLD*KRRTASRLVLI*VCHL 107
           R G  LP ++DKSI +L+DGGLGMAMFSLG                              
Sbjct: 239 RLGWNLPEMIDKSIHLLSDGGLGMAMFSLG------------------------------ 268

Query: 106 IGLFMASQASILACGTWSTILVMVAKFLVGPALM 5
             LFMASQ+SI+ACGT   I+ M+ KF++GPALM
Sbjct: 269 --LFMASQSSIIACGTKMAIITMLLKFVLGPALM 300


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