BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035221
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-...   186   2e-45
ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glyc...   184   7e-45
ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [...   182   2e-44
ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis t...   181   7e-44
ref|XP_002870107.1| hypothetical protein ARALYDRAFT_493139 [Arab...   181   7e-44

>ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-like, partial [Cucumis
           sativus]
          Length = 770

 Score =  186 bits (471), Expect = 2e-45
 Identities = 89/107 (83%), Positives = 96/107 (89%)
 Frame = -2

Query: 321 GTLPSNFIQVLKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEGLTDTIRKDVSIL 142
           G LP+ FIQVLKHGNN+ CSTLELASLNVRNKSAA ECY RTEICLEGL D IR+DVS+L
Sbjct: 397 GKLPNKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSML 456

Query: 141 TLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPELTDNGPLVIDAGRH 1
           TLLAEVLCLLDMIVNSFAHTISTKPVDRYTRP  T+NGP+ I+A RH
Sbjct: 457 TLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARH 503


>ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glycine max]
          Length = 794

 Score =  184 bits (467), Expect = 7e-45
 Identities = 88/107 (82%), Positives = 97/107 (90%)
 Frame = -2

Query: 321 GTLPSNFIQVLKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEGLTDTIRKDVSIL 142
           G LPS FIQV+KHGNN+ CS+LELASLN RNKSAAAECYTRTE+CLE L D IR++VS+L
Sbjct: 419 GKLPSKFIQVVKHGNNIRCSSLELASLNARNKSAAAECYTRTEVCLEELMDDIRENVSVL 478

Query: 141 TLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPELTDNGPLVIDAGRH 1
           TLLAEVLCLLDMIVNSFAH ISTKPVDRYTRPE T+NGPL ID+GRH
Sbjct: 479 TLLAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFTENGPLAIDSGRH 525


>ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [Ricinus communis]
           gi|223529793|gb|EEF31729.1| DNA mismatch repair protein
           mutS, putative [Ricinus communis]
          Length = 553

 Score =  182 bits (462), Expect = 2e-44
 Identities = 88/107 (82%), Positives = 94/107 (87%)
 Frame = -2

Query: 321 GTLPSNFIQVLKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEGLTDTIRKDVSIL 142
           G LPS FIQVLKHGNN+HCSTLELASLNVRN+SAA ECY RTE+CLE L D IR+D S L
Sbjct: 180 GKLPSKFIQVLKHGNNIHCSTLELASLNVRNRSAAEECYIRTEVCLEALLDAIREDASAL 239

Query: 141 TLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPELTDNGPLVIDAGRH 1
           TLLAEVLCLLDM+VNSFAHTISTK VDRYTRPE T +GPL IDAGRH
Sbjct: 240 TLLAEVLCLLDMLVNSFAHTISTKLVDRYTRPEFTSSGPLAIDAGRH 286


>ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
           gi|395406788|sp|F4JP48.1|MSH4_ARATH RecName: Full=DNA
           mismatch repair protein MSH4; Short=AtMSH4; AltName:
           Full=MutS protein homolog 4 gi|332658482|gb|AEE83882.1|
           DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
          Length = 792

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/107 (80%), Positives = 95/107 (88%)
 Frame = -2

Query: 321 GTLPSNFIQVLKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEGLTDTIRKDVSIL 142
           G LP+ F QV+KHG N+HCS+LELASLNVRNKSAA EC+ RTE CLE L D IR+D+S L
Sbjct: 419 GKLPNKFTQVVKHGKNIHCSSLELASLNVRNKSAAGECFIRTETCLEALMDAIREDISAL 478

Query: 141 TLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPELTDNGPLVIDAGRH 1
           TLLAEVLCLLDMIVNSFAHTISTKPVDRY+RPELTD+GPL IDAGRH
Sbjct: 479 TLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGRH 525


>ref|XP_002870107.1| hypothetical protein ARALYDRAFT_493139 [Arabidopsis lyrata subsp.
           lyrata] gi|297315943|gb|EFH46366.1| hypothetical protein
           ARALYDRAFT_493139 [Arabidopsis lyrata subsp. lyrata]
          Length = 792

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/107 (80%), Positives = 95/107 (88%)
 Frame = -2

Query: 321 GTLPSNFIQVLKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEGLTDTIRKDVSIL 142
           G LP+ F QV+KHG N+HCS+LELASLNVRNKSAA EC+ RTE CLE L D IR+D+S L
Sbjct: 419 GKLPNKFTQVVKHGKNIHCSSLELASLNVRNKSAAGECFIRTETCLEALMDAIREDISAL 478

Query: 141 TLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPELTDNGPLVIDAGRH 1
           TLLAEVLCLLDMIVNSFAHTISTKPVDRY+RPELTD+GPL IDAGRH
Sbjct: 479 TLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGRH 525