BLASTX nr result

ID: Cimicifuga21_contig00035218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035218
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262710.2| PREDICTED: uncharacterized protein LOC100266...    65   8e-09
emb|CBI40868.3| unnamed protein product [Vitis vinifera]               65   8e-09
emb|CAN59730.1| hypothetical protein VITISV_042729 [Vitis vinifera]    65   8e-09
ref|XP_002524700.1| conserved hypothetical protein [Ricinus comm...    58   7e-07
ref|XP_002304991.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002262710.2| PREDICTED: uncharacterized protein LOC100266659 [Vitis vinifera]
          Length = 812

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = -1

Query: 200 EFVRDLPNGLMAISPTPLRG-FENLGLLNESRLEVDSGSFLRRCIRSKNLEPLDIGSLKI 24
           E VR+LPNGLMAIS  PL+   +N G   +  +++ S S  +RC RSKN+EPL IGSL++
Sbjct: 142 ELVRELPNGLMAISQAPLQHHIDNAGSQIKLGVDLGSDSGPQRCFRSKNIEPLPIGSLQV 201

Query: 23  FPVGRSL 3
            P GR++
Sbjct: 202 VPYGRNV 208


>emb|CBI40868.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = -1

Query: 200 EFVRDLPNGLMAISPTPLRG-FENLGLLNESRLEVDSGSFLRRCIRSKNLEPLDIGSLKI 24
           E VR+LPNGLMAIS  PL+   +N G   +  +++ S S  +RC RSKN+EPL IGSL++
Sbjct: 142 ELVRELPNGLMAISQAPLQHHIDNAGSQIKLGVDLGSDSGPQRCFRSKNIEPLPIGSLQV 201

Query: 23  FPVGRSL 3
            P GR++
Sbjct: 202 VPYGRNV 208


>emb|CAN59730.1| hypothetical protein VITISV_042729 [Vitis vinifera]
          Length = 1266

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = -1

Query: 200 EFVRDLPNGLMAISPTPLRG-FENLGLLNESRLEVDSGSFLRRCIRSKNLEPLDIGSLKI 24
           E VR+LPNGLMAIS  PL+   +N G   +  +++ S S  +RC RSKN+EPL IGSL++
Sbjct: 229 ELVRELPNGLMAISQAPLQHHIDNAGSQIKLGVDLGSDSGPQRCFRSKNIEPLPIGSLQV 288

Query: 23  FPVGRSL 3
            P GR++
Sbjct: 289 VPYGRNV 295


>ref|XP_002524700.1| conserved hypothetical protein [Ricinus communis]
           gi|223536061|gb|EEF37719.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1033

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
 Frame = -1

Query: 209 QQVEFVRDLPNGLMAISPTPLRGFENLGLLNESRLEV-------DSGSFLRRCIRSKNLE 51
           ++ E +RDLPNGLMAISP       N    + +  ++       DS +F RRC RSKN+E
Sbjct: 165 EEGELMRDLPNGLMAISPAK-HNLSNAASCSTTPCDIKIGGAAADSSAFTRRCFRSKNIE 223

Query: 50  PLDIGSLKIFPVGRSL 3
           P+ IG+L++ P  + +
Sbjct: 224 PMPIGTLQVVPFKKDM 239


>ref|XP_002304991.1| predicted protein [Populus trichocarpa] gi|222847955|gb|EEE85502.1|
           predicted protein [Populus trichocarpa]
          Length = 710

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
 Frame = -1

Query: 200 EFVRDLPNGLMAISPTPLRGFENLGLLNESRLEVDSG-------SFLRRCIRSKNLEPLD 42
           E +RDLPNG MAISP    G  N+G  + S ++V  G       +  RRC RSKN+EP+ 
Sbjct: 137 ELMRDLPNGFMAISPAKNFGNGNVGSCSGSHVDVKVGGGGFNGVNTARRCFRSKNIEPMP 196

Query: 41  IGSLKIFPVGRS 6
           +G L+     RS
Sbjct: 197 VGKLQDLSKERS 208


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