BLASTX nr result

ID: Cimicifuga21_contig00035192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035192
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257...    98   8e-19
ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
emb|CAN79799.1| hypothetical protein VITISV_010922 [Vitis vinifera]    85   5e-15
ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002523264.1| hypothetical protein RCOM_0649410 [Ricinus c...    82   6e-14

>ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257171 [Vitis vinifera]
          Length = 741

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 58/103 (56%), Positives = 65/103 (63%), Gaps = 11/103 (10%)
 Frame = -3

Query: 276 VLPGCLLMMMCEPKLSMEVSKETWVCSKDFIQRRSHKQALHKNGGDEIDINI---CNPSQ 106
           VLP CLL+MMCEPKLSMEVSKETWV S DFI+    K     NG D+    +    NP+Q
Sbjct: 600 VLPDCLLLMMCEPKLSMEVSKETWVNSADFIRWHPEKLVKPNNGQDQPKTRLSTDSNPTQ 659

Query: 105 QQNQHYP---ISYPA-----PSMAPMIEQKLMNAVAYEPFVLT 1
           QQ    P    S+PA      SMA MIEQK +NA AYEPFVLT
Sbjct: 660 QQLHQPPRSSCSFPAAAAAGASMATMIEQKFVNAAAYEPFVLT 702


>ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|222859866|gb|EEE97413.1|
           predicted protein [Populus trichocarpa]
          Length = 773

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 60/117 (51%), Positives = 69/117 (58%), Gaps = 25/117 (21%)
 Frame = -3

Query: 276 VLPGCLLMMMCEPKLSMEVSKETWVCSKDFIQ-RRSHKQALHK-NGGDE------IDINI 121
           +LP CLL+MMCEPKLSMEVSKETWVCS DFI+    H + + K NG DE      IDI  
Sbjct: 614 LLPDCLLLMMCEPKLSMEVSKETWVCSTDFIRWLPEHSRPVSKTNGKDEPKKRVSIDIKP 673

Query: 120 C--------NPSQQQNQHYPISYPA---------PSMAPMIEQKLMNAVAYEPFVLT 1
                    + S QQ +    SYPA          SM+ MIEQKL+ A AYEPFVLT
Sbjct: 674 AQVYNNGNNSNSLQQPRRSSCSYPAKPPARCAGTESMSTMIEQKLVGAKAYEPFVLT 730


>emb|CAN79799.1| hypothetical protein VITISV_010922 [Vitis vinifera]
          Length = 134

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 52/95 (54%), Positives = 58/95 (61%), Gaps = 11/95 (11%)
 Frame = -3

Query: 252 MMCEPKLSMEVSKETWVCSKDFIQRRSHKQALHKNGGDEIDINI---CNPSQQQNQHYP- 85
           MMCEPKLSMEVSKETWV S DFI+    K     NG D+    +    NP+QQQ    P 
Sbjct: 1   MMCEPKLSMEVSKETWVNSADFIRWHPEKLVKPNNGQDQPKTRLSTDSNPTQQQLHQPPR 60

Query: 84  --ISYPA-----PSMAPMIEQKLMNAVAYEPFVLT 1
              S+PA      SMA MIEQK +NA AYEPFVLT
Sbjct: 61  SSCSFPAAAAAGASMATMIEQKFVNAAAYEPFVLT 95


>ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|222847661|gb|EEE85208.1|
           predicted protein [Populus trichocarpa]
          Length = 730

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 56/121 (46%), Positives = 68/121 (56%), Gaps = 29/121 (23%)
 Frame = -3

Query: 276 VLPGCLLMMMCEPKLSMEVSKETWVCSKDFIQ-RRSHKQALHK-NGGDE------IDINI 121
           +LP CLL+MMCEPKLSMEVSKETWVC+ DFI+    H + ++K +G DE      ID N 
Sbjct: 567 LLPDCLLLMMCEPKLSMEVSKETWVCTTDFIRWLPEHSRPVNKADGKDEPKKRASIDSNP 626

Query: 120 C------------NPSQQQNQHYPISYP---------APSMAPMIEQKLMNAVAYEPFVL 4
                        N + QQ      SYP           SM+ MIEQKL+ A AY+PFVL
Sbjct: 627 AQVHNSNSINNNNNNNLQQPARSSCSYPGKPPAHGAGTESMSTMIEQKLVGARAYDPFVL 686

Query: 3   T 1
           T
Sbjct: 687 T 687


>ref|XP_002523264.1| hypothetical protein RCOM_0649410 [Ricinus communis]
           gi|223537477|gb|EEF39103.1| hypothetical protein
           RCOM_0649410 [Ricinus communis]
          Length = 731

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 57/115 (49%), Positives = 66/115 (57%), Gaps = 23/115 (20%)
 Frame = -3

Query: 276 VLPGCLLMMMCEPKLSMEVSKETWVCSKDFI----QRRSHKQALHKNGGDE----IDINI 121
           +LP CLL+MMCEPKLSMEVSKETWVCS DFI    +     Q   ++GGD+    I I+ 
Sbjct: 575 LLPDCLLLMMCEPKLSMEVSKETWVCSTDFIRWLPEHSRPPQVKKRDGGDQPKKRISIDN 634

Query: 120 CNPSQQQN--QHYP---ISYP---------APSMAPMIEQKLMNAV-AYEPFVLT 1
             PS Q N  Q  P    SYP         A SM   IE+KL+    AYEPFVLT
Sbjct: 635 NPPSVQGNPPQQPPRSSCSYPAKPPSRAAGAESMTTAIERKLVGTTKAYEPFVLT 689


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