BLASTX nr result

ID: Cimicifuga21_contig00035140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035140
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64093.1| hypothetical protein VITISV_016055 [Vitis vinifera]    62   5e-08
ref|XP_002530849.1| protein binding protein, putative [Ricinus c...    59   3e-07
ref|XP_002312093.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>emb|CAN64093.1| hypothetical protein VITISV_016055 [Vitis vinifera]
          Length = 252

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/67 (47%), Positives = 39/67 (58%)
 Frame = -2

Query: 202 YCDACGKIASGFVYHGVQKGTPYNFHPCCAVLLPYLHIEGMELQLQKRLTWPSKCFWCGN 23
           YCDACGK   GFVYH  +KG  ++ HPCC  L   L I+G++  L  R T  SKC WC  
Sbjct: 90  YCDACGKPIHGFVYHCKEKG--WDLHPCCRNLTNELDIDGIKFHL--RGTVSSKCIWCNQ 145

Query: 22  SDIWGKV 2
            +  G V
Sbjct: 146 RNPPGSV 152


>ref|XP_002530849.1| protein binding protein, putative [Ricinus communis]
           gi|223529573|gb|EEF31523.1| protein binding protein,
           putative [Ricinus communis]
          Length = 233

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/67 (43%), Positives = 41/67 (61%)
 Frame = -2

Query: 202 YCDACGKIASGFVYHGVQKGTPYNFHPCCAVLLPYLHIEGMELQLQKRLTWPSKCFWCGN 23
           YCDACGK   G+VY    K  P++ HPCC  L   L  +G+ + L+++L  PSKC  CG+
Sbjct: 83  YCDACGKDILGYVYQCNHK-RPFDLHPCCVKLQRTLSADGVTIHLKEKL--PSKCLKCGS 139

Query: 22  SDIWGKV 2
            +I  +V
Sbjct: 140 KEIAKRV 146


>ref|XP_002312093.1| predicted protein [Populus trichocarpa] gi|222851913|gb|EEE89460.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = -2

Query: 202 YCDACGKIASGFVYHGVQKGTPYNFHPCCAVLLPYLHIE-GMELQLQKRLTWPSKCFWCG 26
           YCDACG+  SGFVY    K  P++FHP C  L   L  E G+ +QL+K+L  PSKC +CG
Sbjct: 83  YCDACGEDVSGFVYQCKHK-NPHDFHPRCLKLPRTLTTEDGLMIQLRKKL--PSKCLYCG 139

Query: 25  NSDIWGKV 2
           + +   ++
Sbjct: 140 SKETSNRI 147


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