BLASTX nr result

ID: Cimicifuga21_contig00035106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035106
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...   107   1e-21
emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera]   106   2e-21
ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like...   106   2e-21
ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A...   105   4e-21

>ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 12/99 (12%)
 Frame = +1

Query: 40  TTIALASYFC--NSSLTSPSPGPQTG----------VKVGLDETTLHSYPTLLYSQAKLD 183
           TTI LASYFC  N   + PS G  +           V++GLDE TL SYPTLLYS+AKL 
Sbjct: 25  TTITLASYFCARNQQTSVPSQGRNSADQQLNLQSFVVEIGLDEATLKSYPTLLYSEAKLH 84

Query: 184 NKDDTTSCCSICLCDYKNSDMLRLLTDCRHLCHVKCVNP 300
             D T++CCSICL DYK++D LRLL DC HL H+KCV+P
Sbjct: 85  KTDSTSTCCSICLADYKSTDKLRLLPDCGHLFHLKCVDP 123


>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/104 (52%), Positives = 64/104 (61%), Gaps = 17/104 (16%)
 Frame = +1

Query: 40  TTIALASYFCNSSLTSPSPGPQTG-----------------VKVGLDETTLHSYPTLLYS 168
           TTI LASYFC  +        QT                  V+VG+DE TL +YP LLYS
Sbjct: 34  TTITLASYFCTRNHQQQQQSMQTRRRNRSEEPPDDRLQDIVVEVGIDEATLKNYPKLLYS 93

Query: 169 QAKLDNKDDTTSCCSICLCDYKNSDMLRLLTDCRHLCHVKCVNP 300
           QAKL N D T +CCSICL DYK++DMLRLL DC HL H+KCV+P
Sbjct: 94  QAKLHNTDTTATCCSICLADYKSTDMLRLLPDCGHLFHLKCVDP 137


>emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera]
          Length = 275

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/100 (54%), Positives = 63/100 (63%), Gaps = 13/100 (13%)
 Frame = +1

Query: 40  TTIALASYFCNSSLTSPSPGPQTG-------------VKVGLDETTLHSYPTLLYSQAKL 180
           TTI LASYFC      P+     G             V VGLDE T+ SYP ++YS+AKL
Sbjct: 34  TTITLASYFCTRPQQVPAAAYGGGGLRLQQPVVEEFVVDVGLDEATILSYPKMVYSEAKL 93

Query: 181 DNKDDTTSCCSICLCDYKNSDMLRLLTDCRHLCHVKCVNP 300
            +KD T +CCSICL DYK SDMLRLL DC HL H+KCV+P
Sbjct: 94  QHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDP 133


>ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like [Vitis vinifera]
          Length = 169

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/101 (53%), Positives = 63/101 (62%), Gaps = 14/101 (13%)
 Frame = +1

Query: 40  TTIALASYFCNSSLTSPSPGPQTG--------------VKVGLDETTLHSYPTLLYSQAK 177
           TTI LASYFC      P+     G              V VGLDE T+ SYP ++YS+AK
Sbjct: 34  TTITLASYFCTRPQQVPAAAYGGGGGLREQQPVVEEFVVDVGLDEATILSYPKMVYSEAK 93

Query: 178 LDNKDDTTSCCSICLCDYKNSDMLRLLTDCRHLCHVKCVNP 300
           L +KD T +CCSICL DYK SDMLRLL DC HL H+KCV+P
Sbjct: 94  LQHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDP 134


>ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 172

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/103 (54%), Positives = 67/103 (65%), Gaps = 16/103 (15%)
 Frame = +1

Query: 40  TTIALASYFC-----NSSL---TSPSPGPQTGV--------KVGLDETTLHSYPTLLYSQ 171
           TTI LASY+C     +SS+   T P+  P   V         +GLD+ T+ SYP LLYS+
Sbjct: 35  TTILLASYYCTRNGLSSSVVQRTPPNRSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSE 94

Query: 172 AKLDNKDDTTSCCSICLCDYKNSDMLRLLTDCRHLCHVKCVNP 300
           AKL   D T SCCSICL DYKNSD+LRLL DC HL H+KCV+P
Sbjct: 95  AKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDP 137


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