BLASTX nr result
ID: Cimicifuga21_contig00035106
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00035106 (300 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2... 110 9e-23 ref|XP_002524078.1| ring finger protein, putative [Ricinus commu... 107 1e-21 emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera] 106 2e-21 ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like... 106 2e-21 ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A... 105 4e-21 >ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1| predicted protein [Populus trichocarpa] Length = 154 Score = 110 bits (276), Expect = 9e-23 Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 12/99 (12%) Frame = +1 Query: 40 TTIALASYFC--NSSLTSPSPGPQTG----------VKVGLDETTLHSYPTLLYSQAKLD 183 TTI LASYFC N + PS G + V++GLDE TL SYPTLLYS+AKL Sbjct: 25 TTITLASYFCARNQQTSVPSQGRNSADQQLNLQSFVVEIGLDEATLKSYPTLLYSEAKLH 84 Query: 184 NKDDTTSCCSICLCDYKNSDMLRLLTDCRHLCHVKCVNP 300 D T++CCSICL DYK++D LRLL DC HL H+KCV+P Sbjct: 85 KTDSTSTCCSICLADYKSTDKLRLLPDCGHLFHLKCVDP 123 >ref|XP_002524078.1| ring finger protein, putative [Ricinus communis] gi|223536646|gb|EEF38288.1| ring finger protein, putative [Ricinus communis] Length = 172 Score = 107 bits (266), Expect = 1e-21 Identities = 55/104 (52%), Positives = 64/104 (61%), Gaps = 17/104 (16%) Frame = +1 Query: 40 TTIALASYFCNSSLTSPSPGPQTG-----------------VKVGLDETTLHSYPTLLYS 168 TTI LASYFC + QT V+VG+DE TL +YP LLYS Sbjct: 34 TTITLASYFCTRNHQQQQQSMQTRRRNRSEEPPDDRLQDIVVEVGIDEATLKNYPKLLYS 93 Query: 169 QAKLDNKDDTTSCCSICLCDYKNSDMLRLLTDCRHLCHVKCVNP 300 QAKL N D T +CCSICL DYK++DMLRLL DC HL H+KCV+P Sbjct: 94 QAKLHNTDTTATCCSICLADYKSTDMLRLLPDCGHLFHLKCVDP 137 >emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera] Length = 275 Score = 106 bits (265), Expect = 2e-21 Identities = 54/100 (54%), Positives = 63/100 (63%), Gaps = 13/100 (13%) Frame = +1 Query: 40 TTIALASYFCNSSLTSPSPGPQTG-------------VKVGLDETTLHSYPTLLYSQAKL 180 TTI LASYFC P+ G V VGLDE T+ SYP ++YS+AKL Sbjct: 34 TTITLASYFCTRPQQVPAAAYGGGGLRLQQPVVEEFVVDVGLDEATILSYPKMVYSEAKL 93 Query: 181 DNKDDTTSCCSICLCDYKNSDMLRLLTDCRHLCHVKCVNP 300 +KD T +CCSICL DYK SDMLRLL DC HL H+KCV+P Sbjct: 94 QHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDP 133 >ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like [Vitis vinifera] Length = 169 Score = 106 bits (264), Expect = 2e-21 Identities = 54/101 (53%), Positives = 63/101 (62%), Gaps = 14/101 (13%) Frame = +1 Query: 40 TTIALASYFCNSSLTSPSPGPQTG--------------VKVGLDETTLHSYPTLLYSQAK 177 TTI LASYFC P+ G V VGLDE T+ SYP ++YS+AK Sbjct: 34 TTITLASYFCTRPQQVPAAAYGGGGGLREQQPVVEEFVVDVGLDEATILSYPKMVYSEAK 93 Query: 178 LDNKDDTTSCCSICLCDYKNSDMLRLLTDCRHLCHVKCVNP 300 L +KD T +CCSICL DYK SDMLRLL DC HL H+KCV+P Sbjct: 94 LQHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDP 134 >ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis sativus] Length = 172 Score = 105 bits (262), Expect = 4e-21 Identities = 56/103 (54%), Positives = 67/103 (65%), Gaps = 16/103 (15%) Frame = +1 Query: 40 TTIALASYFC-----NSSL---TSPSPGPQTGV--------KVGLDETTLHSYPTLLYSQ 171 TTI LASY+C +SS+ T P+ P V +GLD+ T+ SYP LLYS+ Sbjct: 35 TTILLASYYCTRNGLSSSVVQRTPPNRSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSE 94 Query: 172 AKLDNKDDTTSCCSICLCDYKNSDMLRLLTDCRHLCHVKCVNP 300 AKL D T SCCSICL DYKNSD+LRLL DC HL H+KCV+P Sbjct: 95 AKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDP 137