BLASTX nr result
ID: Cimicifuga21_contig00035105
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00035105 (300 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2... 115 3e-24 ref|XP_002524078.1| ring finger protein, putative [Ricinus commu... 112 4e-23 emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera] 111 7e-23 ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like... 110 9e-23 ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A... 110 2e-22 >ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1| predicted protein [Populus trichocarpa] Length = 154 Score = 115 bits (289), Expect = 3e-24 Identities = 58/99 (58%), Positives = 68/99 (68%), Gaps = 12/99 (12%) Frame = -1 Query: 261 TTIAPASYFC--NSSLTSPSPGPQTG----------VEVGLDETTLHSYPTLLYSQAKLD 118 TTI ASYFC N + PS G + VE+GLDE TL SYPTLLYS+AKL Sbjct: 25 TTITLASYFCARNQQTSVPSQGRNSADQQLNLQSFVVEIGLDEATLKSYPTLLYSEAKLH 84 Query: 117 NKDDTTSCCSICLCDYKNSDMLRLLPDCRHLFHVKCVNP 1 D T++CCSICL DYK++D LRLLPDC HLFH+KCV+P Sbjct: 85 KTDSTSTCCSICLADYKSTDKLRLLPDCGHLFHLKCVDP 123 >ref|XP_002524078.1| ring finger protein, putative [Ricinus communis] gi|223536646|gb|EEF38288.1| ring finger protein, putative [Ricinus communis] Length = 172 Score = 112 bits (279), Expect = 4e-23 Identities = 57/104 (54%), Positives = 65/104 (62%), Gaps = 17/104 (16%) Frame = -1 Query: 261 TTIAPASYFCNSSLTSPSPGPQTG-----------------VEVGLDETTLHSYPTLLYS 133 TTI ASYFC + QT VEVG+DE TL +YP LLYS Sbjct: 34 TTITLASYFCTRNHQQQQQSMQTRRRNRSEEPPDDRLQDIVVEVGIDEATLKNYPKLLYS 93 Query: 132 QAKLDNKDDTTSCCSICLCDYKNSDMLRLLPDCRHLFHVKCVNP 1 QAKL N D T +CCSICL DYK++DMLRLLPDC HLFH+KCV+P Sbjct: 94 QAKLHNTDTTATCCSICLADYKSTDMLRLLPDCGHLFHLKCVDP 137 >emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera] Length = 275 Score = 111 bits (277), Expect = 7e-23 Identities = 55/100 (55%), Positives = 65/100 (65%), Gaps = 13/100 (13%) Frame = -1 Query: 261 TTIAPASYFCNSSLTSPSPGPQTG-------------VEVGLDETTLHSYPTLLYSQAKL 121 TTI ASYFC P+ G V+VGLDE T+ SYP ++YS+AKL Sbjct: 34 TTITLASYFCTRPQQVPAAAYGGGGLRLQQPVVEEFVVDVGLDEATILSYPKMVYSEAKL 93 Query: 120 DNKDDTTSCCSICLCDYKNSDMLRLLPDCRHLFHVKCVNP 1 +KD T +CCSICL DYK SDMLRLLPDC HLFH+KCV+P Sbjct: 94 QHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDP 133 >ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like [Vitis vinifera] Length = 169 Score = 110 bits (276), Expect = 9e-23 Identities = 55/101 (54%), Positives = 65/101 (64%), Gaps = 14/101 (13%) Frame = -1 Query: 261 TTIAPASYFCNSSLTSPSPGPQTG--------------VEVGLDETTLHSYPTLLYSQAK 124 TTI ASYFC P+ G V+VGLDE T+ SYP ++YS+AK Sbjct: 34 TTITLASYFCTRPQQVPAAAYGGGGGLREQQPVVEEFVVDVGLDEATILSYPKMVYSEAK 93 Query: 123 LDNKDDTTSCCSICLCDYKNSDMLRLLPDCRHLFHVKCVNP 1 L +KD T +CCSICL DYK SDMLRLLPDC HLFH+KCV+P Sbjct: 94 LQHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDP 134 >ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis sativus] Length = 172 Score = 110 bits (274), Expect = 2e-22 Identities = 57/103 (55%), Positives = 69/103 (66%), Gaps = 16/103 (15%) Frame = -1 Query: 261 TTIAPASYFC-----NSSL---TSPSPGPQTGV--------EVGLDETTLHSYPTLLYSQ 130 TTI ASY+C +SS+ T P+ P V ++GLD+ T+ SYP LLYS+ Sbjct: 35 TTILLASYYCTRNGLSSSVVQRTPPNRSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSE 94 Query: 129 AKLDNKDDTTSCCSICLCDYKNSDMLRLLPDCRHLFHVKCVNP 1 AKL D T SCCSICL DYKNSD+LRLLPDC HLFH+KCV+P Sbjct: 95 AKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDP 137