BLASTX nr result

ID: Cimicifuga21_contig00035105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035105
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...   112   4e-23
emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera]   111   7e-23
ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like...   110   9e-23
ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A...   110   2e-22

>ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/99 (58%), Positives = 68/99 (68%), Gaps = 12/99 (12%)
 Frame = -1

Query: 261 TTIAPASYFC--NSSLTSPSPGPQTG----------VEVGLDETTLHSYPTLLYSQAKLD 118
           TTI  ASYFC  N   + PS G  +           VE+GLDE TL SYPTLLYS+AKL 
Sbjct: 25  TTITLASYFCARNQQTSVPSQGRNSADQQLNLQSFVVEIGLDEATLKSYPTLLYSEAKLH 84

Query: 117 NKDDTTSCCSICLCDYKNSDMLRLLPDCRHLFHVKCVNP 1
             D T++CCSICL DYK++D LRLLPDC HLFH+KCV+P
Sbjct: 85  KTDSTSTCCSICLADYKSTDKLRLLPDCGHLFHLKCVDP 123


>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/104 (54%), Positives = 65/104 (62%), Gaps = 17/104 (16%)
 Frame = -1

Query: 261 TTIAPASYFCNSSLTSPSPGPQTG-----------------VEVGLDETTLHSYPTLLYS 133
           TTI  ASYFC  +        QT                  VEVG+DE TL +YP LLYS
Sbjct: 34  TTITLASYFCTRNHQQQQQSMQTRRRNRSEEPPDDRLQDIVVEVGIDEATLKNYPKLLYS 93

Query: 132 QAKLDNKDDTTSCCSICLCDYKNSDMLRLLPDCRHLFHVKCVNP 1
           QAKL N D T +CCSICL DYK++DMLRLLPDC HLFH+KCV+P
Sbjct: 94  QAKLHNTDTTATCCSICLADYKSTDMLRLLPDCGHLFHLKCVDP 137


>emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera]
          Length = 275

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/100 (55%), Positives = 65/100 (65%), Gaps = 13/100 (13%)
 Frame = -1

Query: 261 TTIAPASYFCNSSLTSPSPGPQTG-------------VEVGLDETTLHSYPTLLYSQAKL 121
           TTI  ASYFC      P+     G             V+VGLDE T+ SYP ++YS+AKL
Sbjct: 34  TTITLASYFCTRPQQVPAAAYGGGGLRLQQPVVEEFVVDVGLDEATILSYPKMVYSEAKL 93

Query: 120 DNKDDTTSCCSICLCDYKNSDMLRLLPDCRHLFHVKCVNP 1
            +KD T +CCSICL DYK SDMLRLLPDC HLFH+KCV+P
Sbjct: 94  QHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDP 133


>ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like [Vitis vinifera]
          Length = 169

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/101 (54%), Positives = 65/101 (64%), Gaps = 14/101 (13%)
 Frame = -1

Query: 261 TTIAPASYFCNSSLTSPSPGPQTG--------------VEVGLDETTLHSYPTLLYSQAK 124
           TTI  ASYFC      P+     G              V+VGLDE T+ SYP ++YS+AK
Sbjct: 34  TTITLASYFCTRPQQVPAAAYGGGGGLREQQPVVEEFVVDVGLDEATILSYPKMVYSEAK 93

Query: 123 LDNKDDTTSCCSICLCDYKNSDMLRLLPDCRHLFHVKCVNP 1
           L +KD T +CCSICL DYK SDMLRLLPDC HLFH+KCV+P
Sbjct: 94  LQHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDP 134


>ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 172

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/103 (55%), Positives = 69/103 (66%), Gaps = 16/103 (15%)
 Frame = -1

Query: 261 TTIAPASYFC-----NSSL---TSPSPGPQTGV--------EVGLDETTLHSYPTLLYSQ 130
           TTI  ASY+C     +SS+   T P+  P   V        ++GLD+ T+ SYP LLYS+
Sbjct: 35  TTILLASYYCTRNGLSSSVVQRTPPNRSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSE 94

Query: 129 AKLDNKDDTTSCCSICLCDYKNSDMLRLLPDCRHLFHVKCVNP 1
           AKL   D T SCCSICL DYKNSD+LRLLPDC HLFH+KCV+P
Sbjct: 95  AKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDP 137


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