BLASTX nr result

ID: Cimicifuga21_contig00035035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035035
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304433.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002509599.1| nucleic acid binding protein, putative [Rici...   138   4e-31
ref|XP_002509600.1| nucleic acid binding protein, putative [Rici...   136   2e-30
ref|XP_003537527.1| PREDICTED: uncharacterized protein LOC100785...   135   3e-30
ref|XP_004159528.1| PREDICTED: uncharacterized LOC101211196 [Cuc...   129   2e-28

>ref|XP_002304433.1| predicted protein [Populus trichocarpa] gi|222841865|gb|EEE79412.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  153 bits (386), Expect = 2e-35
 Identities = 79/137 (57%), Positives = 99/137 (72%), Gaps = 13/137 (9%)
 Frame = +1

Query: 40  FTHVFKEARLRCLKTVVVGDNNDGALKRCADAAFSWKEIMLGKAKKDAVSVLGRWKDRDV 219
           F HV KEA+ RCLKTVVVGD NDGALKR ADA FSW+EI++GKAKKDA +V+GRWKDRDV
Sbjct: 164 FVHVLKEAKSRCLKTVVVGDVNDGALKRVADAGFSWQEILMGKAKKDAETVVGRWKDRDV 223

Query: 220 LKRLDWTYRPELEKSDH----DFDASEF-------ENEDGQVEEMFQQGQDLA--NKEDV 360
           LKRL+WTY PE+EK+ H    +FD  E        ++EDG ++ +   G D+    KED 
Sbjct: 224 LKRLEWTYDPEVEKNLHGMVYEFDNHESKDECDGNDSEDGDIDNIL-DGDDVGCLQKEDA 282

Query: 361 RPWWELDPDVDVTPAKS 411
           R WWELD + +VT ++S
Sbjct: 283 RGWWELDSNPEVTSSQS 299


>ref|XP_002509599.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223549498|gb|EEF50986.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 294

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/127 (55%), Positives = 90/127 (70%), Gaps = 9/127 (7%)
 Frame = +1

Query: 40  FTHVFKEARLRCLKTVVVGDNNDGALKRCADAAFSWKEIMLGKAKKDAVSVLGRWKDRDV 219
           F  V KEA+LRC+KTVVVGD NDGALKR ADA FSW+EI++GKAKK+AVSV+G+WKDRD+
Sbjct: 168 FVGVLKEAKLRCVKTVVVGDINDGALKRVADAEFSWQEILMGKAKKEAVSVVGKWKDRDI 227

Query: 220 LKRLDWTYRPELEK-------SDHDFDASEFENE--DGQVEEMFQQGQDLANKEDVRPWW 372
           LK+L+WTY PE +K       +D++ D  E EN   DG  +E    G +   KE V  WW
Sbjct: 228 LKKLEWTYNPEEQKKFVVNAFNDYNSDNDEIENGDFDGFSDE---NGANCMQKEAVGAWW 284

Query: 373 ELDPDVD 393
           EL+ D +
Sbjct: 285 ELNSDTE 291


>ref|XP_002509600.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223549499|gb|EEF50987.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 375

 Score =  136 bits (343), Expect = 2e-30
 Identities = 69/128 (53%), Positives = 91/128 (71%), Gaps = 9/128 (7%)
 Frame = +1

Query: 40  FTHVFKEARLRCLKTVVVGDNNDGALKRCADAAFSWKEIMLGKAKKDAVSVLGRWKDRDV 219
           F  V KEA+LRC+KTVVVGD NDGALKR ADA FSW+EI++GKAKK+AVSV+G+WKDRD+
Sbjct: 249 FVGVLKEAKLRCVKTVVVGDINDGALKRVADAEFSWQEILMGKAKKEAVSVVGKWKDRDI 308

Query: 220 LKRLDWTYRPELEK-------SDHDFDASEFENE--DGQVEEMFQQGQDLANKEDVRPWW 372
           LK+L+WTY PE +K       +D++ D  E +N   DG  +E    G +   KE V  WW
Sbjct: 309 LKKLEWTYNPEEQKKFVVNAFNDYNGDTDEIDNGDFDGFSDE---NGANCMQKEAVGAWW 365

Query: 373 ELDPDVDV 396
           EL+ + ++
Sbjct: 366 ELNSETEL 373


>ref|XP_003537527.1| PREDICTED: uncharacterized protein LOC100785257 [Glycine max]
          Length = 393

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/125 (52%), Positives = 88/125 (70%), Gaps = 1/125 (0%)
 Frame = +1

Query: 40  FTHVFKEARLRCLKTVVVGDNNDGALKRCADAAFSWKEIMLGKAKKDAVSVLGRWKDRDV 219
           F  V  EA++RCLKTVV+GD ++G LKR AD AFSW+EI++GKAKK AVSV+  WKDRD+
Sbjct: 259 FVDVINEAKMRCLKTVVIGDIDEGFLKRTADTAFSWEEILMGKAKKQAVSVVKNWKDRDI 318

Query: 220 LKRLDWTYRPELEKSDHDFDASEFE-NEDGQVEEMFQQGQDLANKEDVRPWWELDPDVDV 396
           LK+L+WTY P+ +KS+ + D +  E +ED  +E+      D A K+D   WWELD D D 
Sbjct: 319 LKKLEWTYNPDEDKSNFNLDDTVTEASEDDNIEDTTCDEVDDAYKDDRGSWWELDSDDDA 378

Query: 397 TPAKS 411
           T  +S
Sbjct: 379 TNRQS 383


>ref|XP_004159528.1| PREDICTED: uncharacterized LOC101211196 [Cucumis sativus]
          Length = 368

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/124 (51%), Positives = 81/124 (65%)
 Frame = +1

Query: 40  FTHVFKEARLRCLKTVVVGDNNDGALKRCADAAFSWKEIMLGKAKKDAVSVLGRWKDRDV 219
           F +V KEA+LRCL+TVVVGD NDG LKR AD  FSW+EI++GKAKK+AVSV+G+WKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV 300

Query: 220 LKRLDWTYRPELEKSDHDFDASEFENEDGQVEEMFQQGQDLANKEDVRPWWELDPDVDVT 399
           LKRL+WTY P LEK     D    E++D +   +     +     D   WW+L  D +  
Sbjct: 301 LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD 360

Query: 400 PAKS 411
              S
Sbjct: 361 TVSS 364


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