BLASTX nr result

ID: Cimicifuga21_contig00035023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035023
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24131.3| unnamed protein product [Vitis vinifera]              226   3e-57
ref|XP_002265699.1| PREDICTED: general transcription factor 3C p...   226   3e-57
ref|XP_004146849.1| PREDICTED: transcription factor tau subunit ...   184   1e-44
ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|2...   182   4e-44
ref|XP_003540640.1| PREDICTED: general transcription factor 3C p...   182   6e-44

>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  226 bits (576), Expect = 3e-57
 Identities = 108/163 (66%), Positives = 133/163 (81%)
 Frame = +1

Query: 142 KQGNIGQATYCLSKAIKADPEDTSLRFNRATLYVELGDYQKAAESYYQIVELCPENVDAR 321
           +QGN GQA YCLSKAI ADPED SLRF+RA+LYVELG+YQKAAESY QI +L PENV+A 
Sbjct: 173 EQGNTGQARYCLSKAITADPEDISLRFHRASLYVELGEYQKAAESYEQISQLFPENVEAP 232

Query: 322 KMAAKMYKKCNQVDQSIVVLEDYIKDHSREADFSVVNLLVSIHMESNSHVKALQQIERAR 501
           K  AK+YKKC QV++S+ +LEDYIKDH  +AD S+V++L ++ ME+N H +ALQ IE A+
Sbjct: 233 KTGAKLYKKCGQVERSVSILEDYIKDHPTKADLSIVDMLAAVCMENNVHDRALQHIEHAQ 292

Query: 502 SLYCSQKQLPIDLTVKAGICHVHLGNIEEAEILFGILQMERAD 630
            LYCS K LP+ LT+KAGICH+HLGNIE+AE LF +LQ E  D
Sbjct: 293 LLYCSGKDLPLHLTIKAGICHIHLGNIEKAEALFSVLQRETCD 335


>ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like
           [Vitis vinifera]
          Length = 1110

 Score =  226 bits (576), Expect = 3e-57
 Identities = 108/163 (66%), Positives = 133/163 (81%)
 Frame = +1

Query: 142 KQGNIGQATYCLSKAIKADPEDTSLRFNRATLYVELGDYQKAAESYYQIVELCPENVDAR 321
           +QGN GQA YCLSKAI ADPED SLRF+RA+LYVELG+YQKAAESY QI +L PENV+A 
Sbjct: 213 EQGNTGQARYCLSKAITADPEDISLRFHRASLYVELGEYQKAAESYEQISQLFPENVEAP 272

Query: 322 KMAAKMYKKCNQVDQSIVVLEDYIKDHSREADFSVVNLLVSIHMESNSHVKALQQIERAR 501
           K  AK+YKKC QV++S+ +LEDYIKDH  +AD S+V++L ++ ME+N H +ALQ IE A+
Sbjct: 273 KTGAKLYKKCGQVERSVSILEDYIKDHPTKADLSIVDMLAAVCMENNVHDRALQHIEHAQ 332

Query: 502 SLYCSQKQLPIDLTVKAGICHVHLGNIEEAEILFGILQMERAD 630
            LYCS K LP+ LT+KAGICH+HLGNIE+AE LF +LQ E  D
Sbjct: 333 LLYCSGKDLPLHLTIKAGICHIHLGNIEKAEALFSVLQRETCD 375


>ref|XP_004146849.1| PREDICTED: transcription factor tau subunit sfc4-like [Cucumis
           sativus]
          Length = 927

 Score =  184 bits (468), Expect = 1e-44
 Identities = 90/169 (53%), Positives = 126/169 (74%)
 Frame = +1

Query: 145 QGNIGQATYCLSKAIKADPEDTSLRFNRATLYVELGDYQKAAESYYQIVELCPENVDARK 324
           +G+I QA+YCLSKAIKA+P+D +L F+RA+LY+E GD +KAAE+Y QI + C  NV+A  
Sbjct: 238 RGDIDQASYCLSKAIKAEPDDINLLFHRASLYLERGDCEKAAETYDQIHQQCLGNVEALM 297

Query: 325 MAAKMYKKCNQVDQSIVVLEDYIKDHSREADFSVVNLLVSIHMESNSHVKALQQIERARS 504
             AK+Y+KC  ++++I +LEDYIK H  EAD  VV+LL S++M S    KAL++IE A  
Sbjct: 298 TGAKLYQKCGHLERAICILEDYIKGHPSEADLDVVDLLASLYMGSKEFSKALERIEHADR 357

Query: 505 LYCSQKQLPIDLTVKAGICHVHLGNIEEAEILFGILQMERADDVANLII 651
           +YC+  +LP++LT KAGICH HLG++E+AE LF  L+ E   D +NL+I
Sbjct: 358 VYCAGNELPLNLTTKAGICHAHLGDLEKAECLFANLRRETTYDHSNLMI 406


>ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|222872248|gb|EEF09379.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score =  182 bits (463), Expect = 4e-44
 Identities = 91/160 (56%), Positives = 117/160 (73%)
 Frame = +1

Query: 142 KQGNIGQATYCLSKAIKADPEDTSLRFNRATLYVELGDYQKAAESYYQIVELCPENVDAR 321
           +QG+I +A  CLSKAI ADP+D SLR   A  Y ELGD+Q+AAESY QIV +CPE+V+A 
Sbjct: 223 EQGDIARAWKCLSKAISADPDDISLRSLHALFYDELGDHQRAAESYEQIVRICPEDVEAI 282

Query: 322 KMAAKMYKKCNQVDQSIVVLEDYIKDHSREADFSVVNLLVSIHMESNSHVKALQQIERAR 501
           K AAKM+  C Q+ + + +LEDY+K H  EAD SV+ LL  + ME ++H  ALQ IE A+
Sbjct: 283 KTAAKMHLNCGQIKRCVGILEDYLKGHPSEADLSVIILLADVFMEIDAHNNALQHIEHAQ 342

Query: 502 SLYCSQKQLPIDLTVKAGICHVHLGNIEEAEILFGILQME 621
            +Y S K+LP++L +KAGICHV LGNIE+AEI F  LQ E
Sbjct: 343 MIYYSGKELPLELMIKAGICHVFLGNIEKAEIHFSALQQE 382


>ref|XP_003540640.1| PREDICTED: general transcription factor 3C polypeptide 3-like
           [Glycine max]
          Length = 919

 Score =  182 bits (461), Expect = 6e-44
 Identities = 93/170 (54%), Positives = 125/170 (73%)
 Frame = +1

Query: 139 RKQGNIGQATYCLSKAIKADPEDTSLRFNRATLYVELGDYQKAAESYYQIVELCPENVDA 318
           R+QG + QA YCL KAIKADP+D +LRF+ A LY ELG YQKAA +Y Q+ +LC EN+DA
Sbjct: 231 REQGYVDQAGYCLLKAIKADPKDVTLRFHLARLYAELGHYQKAAVTYEQVHKLCCENIDA 290

Query: 319 RKMAAKMYKKCNQVDQSIVVLEDYIKDHSREADFSVVNLLVSIHMESNSHVKALQQIERA 498
            K AAK YKKC QV+ SI +LEDYIK     A+ SVV+LL ++ ME+ +H +ALQ IE A
Sbjct: 291 LKAAAKFYKKCGQVEYSIQILEDYIKSQPDGANVSVVDLLGTVLMETKAHDRALQHIEHA 350

Query: 499 RSLYCSQKQLPIDLTVKAGICHVHLGNIEEAEILFGILQMERADDVANLI 648
           +++  ++K+LP++L +KAGICH HLGN+E A+ LF  L+ E A    +L+
Sbjct: 351 QTVN-ARKELPLNLKIKAGICHAHLGNMERAQALFNDLKPENASKHIDLV 399


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