BLASTX nr result

ID: Cimicifuga21_contig00035022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035022
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 ...   143   2e-32
ref|XP_002317357.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_002522770.1| conserved hypothetical protein [Ricinus comm...   127   9e-28
gb|AAK73103.1|AF391808_1 hypothetical protein 4 [Zea mays]            124   8e-27
ref|XP_004150300.1| PREDICTED: uncharacterized protein LOC101209...   122   2e-26

>ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 [Vitis vinifera]
           gi|296089891|emb|CBI39710.3| unnamed protein product
           [Vitis vinifera]
          Length = 366

 Score =  143 bits (360), Expect = 2e-32
 Identities = 65/95 (68%), Positives = 78/95 (82%), Gaps = 3/95 (3%)
 Frame = -1

Query: 398 ASTSGSI--HRATDDTEENPIWECDMCTLFNPPLAPICEACGTQKPKDVTTKFKIWSCKF 225
           AS SGS+  H AT +TEE+ +WEC +CTL NPPLAPIC+ C T+KPKDV  K+K+WSCKF
Sbjct: 272 ASASGSVLGHNATHNTEESIMWECGICTLLNPPLAPICKVCSTEKPKDVGIKYKVWSCKF 331

Query: 224 CTLENCVKLDKCLACGQWRYSYGAPVSSQL-NLGT 123
           CTLEN V+LDKC ACGQWRYS+G PVS++  NLGT
Sbjct: 332 CTLENNVELDKCGACGQWRYSHGPPVSTRAPNLGT 366


>ref|XP_002317357.1| predicted protein [Populus trichocarpa] gi|222860422|gb|EEE97969.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/94 (69%), Positives = 74/94 (78%), Gaps = 3/94 (3%)
 Frame = -1

Query: 395 STSGSI-HRATDDTEE-NPIWECDMCTLFNPPLAPICEACGTQKPKDVTTKFKIWSCKFC 222
           S+ GSI +R T  T E + +WEC  CTL NP LAPICE CG QKPKD +TK KIWSCKFC
Sbjct: 295 SSFGSICNRDTAHTPEASSLWECGTCTLLNPQLAPICELCGAQKPKDASTKNKIWSCKFC 354

Query: 221 TLENCVKLDKCLACGQWRYSYGAPVSSQL-NLGT 123
           TLENC+KLD+CLACGQWRYS G PVS++  NLGT
Sbjct: 355 TLENCLKLDRCLACGQWRYSNGPPVSTRAPNLGT 388


>ref|XP_002522770.1| conserved hypothetical protein [Ricinus communis]
           gi|223538008|gb|EEF39621.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 404

 Score =  127 bits (319), Expect = 9e-28
 Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
 Frame = -1

Query: 395 STSGSI-HRATDDTEENPIWECDMCTLFNPPLAPICEACGTQKPKDVTTKFKIWSCKFCT 219
           S+ GSI +     +EE  +WEC  CTL NPPLAPIC  C T+KPKD + K+KIWSCKFCT
Sbjct: 312 SSLGSIANHEIHSSEELAMWECAACTLLNPPLAPICNLCSTEKPKDASAKYKIWSCKFCT 371

Query: 218 LENCVKLDKCLACGQWRYSYGAPVSS 141
           LEN VKLDKC AC +WRYSYG PVS+
Sbjct: 372 LENSVKLDKCSACSEWRYSYGPPVST 397


>gb|AAK73103.1|AF391808_1 hypothetical protein 4 [Zea mays]
          Length = 339

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/105 (57%), Positives = 66/105 (62%), Gaps = 7/105 (6%)
 Frame = -1

Query: 434 GPDLGLRKN-AGQASTSGSIH------RATDDTEENPIWECDMCTLFNPPLAPICEACGT 276
           G D G   N + Q STS  IH      R T D  ++  WEC  CTL N PLAPICE CGT
Sbjct: 229 GKDKGSCSNTSAQPSTSSRIHIAARDDRTTSDALDSSKWECGACTLLNQPLAPICEVCGT 288

Query: 275 QKPKDVTTKFKIWSCKFCTLENCVKLDKCLACGQWRYSYGAPVSS 141
            KPK    K+  WSCKFCTLEN  KLDKC AC QWRYSYG PV++
Sbjct: 289 TKPKIAKAKYTTWSCKFCTLENSTKLDKCSACDQWRYSYGPPVAT 333


>ref|XP_004150300.1| PREDICTED: uncharacterized protein LOC101209563, partial [Cucumis
           sativus] gi|449510535|ref|XP_004163693.1| PREDICTED:
           uncharacterized LOC101209563, partial [Cucumis sativus]
          Length = 423

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/103 (57%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
 Frame = -1

Query: 428 DLGLRKNAGQASTSGSIHRATDDTEENPIWECDMCTLFNPPLAPICEACGTQKPKDVTTK 249
           DL    +   A   G+IH       E  +WEC  CTL NPPLAPICE C +QKP D  T+
Sbjct: 326 DLSCSSSNLMARNDGTIHPG-----ELSMWECGNCTLLNPPLAPICELCFSQKPTDSDTR 380

Query: 248 FKIWSCKFCTLENCVKLDKCLACGQWRYSYGAPVSSQ-LNLGT 123
           +K WSCKFCTLEN VKL+KC AC QWRYS+G PVS++  NLGT
Sbjct: 381 YKFWSCKFCTLENSVKLEKCTACDQWRYSHGQPVSTRGPNLGT 423


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