BLASTX nr result

ID: Cimicifuga21_contig00035009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00035009
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277396.2| PREDICTED: protein ABCI12, chloroplastic-lik...   302   3e-80
ref|XP_002312731.1| predicted protein [Populus trichocarpa] gi|2...   295   3e-78
emb|CBI26163.3| unnamed protein product [Vitis vinifera]              294   6e-78
ref|XP_004153425.1| PREDICTED: protein ABCI12, chloroplastic-lik...   290   1e-76
ref|XP_004145039.1| PREDICTED: protein ABCI12, chloroplastic-lik...   290   1e-76

>ref|XP_002277396.2| PREDICTED: protein ABCI12, chloroplastic-like [Vitis vinifera]
          Length = 390

 Score =  302 bits (773), Expect = 3e-80
 Identities = 147/185 (79%), Positives = 169/185 (91%)
 Frame = +3

Query: 3   AMMGLPSIPTSLGGYSYVVMKLGPLQLTRKGLSLASTSACLTFTVFQSASLCLTTTTPEQ 182
           AMMGLP++P SLGGYSY+VMKLGPLQLTRKGLS+AST+ACLTFT+FQSASLCLTTTTPEQ
Sbjct: 195 AMMGLPNLPDSLGGYSYLVMKLGPLQLTRKGLSVASTAACLTFTIFQSASLCLTTTTPEQ 254

Query: 183 LASALRWFMLPLTRLGVPVSEIVLTLLLSLRFINLVFDEVRNAALGIVARRINWQQLTIM 362
           LASAL WFM PL  +GVPV+EI LTLLLSLRFI+LVFDEVRN ALGI++RRINWQQLT M
Sbjct: 255 LASALWWFMRPLRFIGVPVAEITLTLLLSLRFISLVFDEVRNVALGIISRRINWQQLTTM 314

Query: 363 ETVDVFFMYIGRIFKNIFSHSEKISQAMIVRGFRGDSNNHKIYLFSNSSIGMEDIISLLC 542
           ET+D+F  Y+ RIFKNIFSH+E+ISQAMIVRGFRGDS+ HK+Y  S+SSI MED++SLLC
Sbjct: 315 ETIDIFVSYVRRIFKNIFSHAEQISQAMIVRGFRGDSSTHKLYFLSDSSIRMEDVVSLLC 374

Query: 543 LFGVI 557
           L G+I
Sbjct: 375 LIGII 379


>ref|XP_002312731.1| predicted protein [Populus trichocarpa] gi|222852551|gb|EEE90098.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  295 bits (756), Expect = 3e-78
 Identities = 144/185 (77%), Positives = 166/185 (89%)
 Frame = +3

Query: 3   AMMGLPSIPTSLGGYSYVVMKLGPLQLTRKGLSLASTSACLTFTVFQSASLCLTTTTPEQ 182
           A+ GLP++P SL GYSY++MKLGPLQ TRKGLS+AST+ACLTFTVFQSASLCL TTTPEQ
Sbjct: 187 AITGLPNLPMSLSGYSYLIMKLGPLQFTRKGLSVASTAACLTFTVFQSASLCLATTTPEQ 246

Query: 183 LASALRWFMLPLTRLGVPVSEIVLTLLLSLRFINLVFDEVRNAALGIVARRINWQQLTIM 362
           LA A+RWFMLPL  +GVPV+EI LTLLLSLRFINLVFDEVRN +LGIV+RRI W+QLTI+
Sbjct: 247 LAFAMRWFMLPLRYIGVPVAEITLTLLLSLRFINLVFDEVRNVSLGIVSRRIKWKQLTII 306

Query: 363 ETVDVFFMYIGRIFKNIFSHSEKISQAMIVRGFRGDSNNHKIYLFSNSSIGMEDIISLLC 542
           ET+D+F  YI RIFKNIFSH+E+ISQAMIVRGFRGDSN+HKIY  S+SSIGM D +SLLC
Sbjct: 307 ETIDIFASYIRRIFKNIFSHAEQISQAMIVRGFRGDSNSHKIYFLSDSSIGMADFVSLLC 366

Query: 543 LFGVI 557
           L GV+
Sbjct: 367 LIGVV 371


>emb|CBI26163.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  294 bits (753), Expect = 6e-78
 Identities = 147/194 (75%), Positives = 169/194 (87%), Gaps = 9/194 (4%)
 Frame = +3

Query: 3   AMMGLPSIPTSLGGYSYVVMKLGPLQLTRKGLSLASTSACLTFT---------VFQSASL 155
           AMMGLP++P SLGGYSY+VMKLGPLQLTRKGLS+AST+ACLTFT         +FQSASL
Sbjct: 195 AMMGLPNLPDSLGGYSYLVMKLGPLQLTRKGLSVASTAACLTFTAKINLFLCKIFQSASL 254

Query: 156 CLTTTTPEQLASALRWFMLPLTRLGVPVSEIVLTLLLSLRFINLVFDEVRNAALGIVARR 335
           CLTTTTPEQLASAL WFM PL  +GVPV+EI LTLLLSLRFI+LVFDEVRN ALGI++RR
Sbjct: 255 CLTTTTPEQLASALWWFMRPLRFIGVPVAEITLTLLLSLRFISLVFDEVRNVALGIISRR 314

Query: 336 INWQQLTIMETVDVFFMYIGRIFKNIFSHSEKISQAMIVRGFRGDSNNHKIYLFSNSSIG 515
           INWQQLT MET+D+F  Y+ RIFKNIFSH+E+ISQAMIVRGFRGDS+ HK+Y  S+SSI 
Sbjct: 315 INWQQLTTMETIDIFVSYVRRIFKNIFSHAEQISQAMIVRGFRGDSSTHKLYFLSDSSIR 374

Query: 516 MEDIISLLCLFGVI 557
           MED++SLLCL G+I
Sbjct: 375 MEDVVSLLCLIGII 388


>ref|XP_004153425.1| PREDICTED: protein ABCI12, chloroplastic-like [Cucumis sativus]
          Length = 390

 Score =  290 bits (741), Expect = 1e-76
 Identities = 143/184 (77%), Positives = 161/184 (87%)
 Frame = +3

Query: 6   MMGLPSIPTSLGGYSYVVMKLGPLQLTRKGLSLASTSACLTFTVFQSASLCLTTTTPEQL 185
           MMGLP +P S+GGYSY++ KLGPL  TRKGLS+ASTSACLTF VFQSASLCLTTT PEQL
Sbjct: 196 MMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQL 255

Query: 186 ASALRWFMLPLTRLGVPVSEIVLTLLLSLRFINLVFDEVRNAALGIVARRINWQQLTIME 365
           A A+RWFMLPL   GVPV+EI LTLLLSLRF++LVFDEVRN ALGIV+RRINWQ LT ME
Sbjct: 256 AFAIRWFMLPLGYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGIVSRRINWQMLTTME 315

Query: 366 TVDVFFMYIGRIFKNIFSHSEKISQAMIVRGFRGDSNNHKIYLFSNSSIGMEDIISLLCL 545
           TVDVFF Y+ RIFKNIFSH+E+ISQAMIVRGFRGDS++HK+Y  SNSS  M +I+SLLCL
Sbjct: 316 TVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNSSSRMANILSLLCL 375

Query: 546 FGVI 557
            GVI
Sbjct: 376 IGVI 379


>ref|XP_004145039.1| PREDICTED: protein ABCI12, chloroplastic-like [Cucumis sativus]
          Length = 546

 Score =  290 bits (741), Expect = 1e-76
 Identities = 143/184 (77%), Positives = 161/184 (87%)
 Frame = +3

Query: 6   MMGLPSIPTSLGGYSYVVMKLGPLQLTRKGLSLASTSACLTFTVFQSASLCLTTTTPEQL 185
           MMGLP +P S+GGYSY++ KLGPL  TRKGLS+ASTSACLTF VFQSASLCLTTT PEQL
Sbjct: 352 MMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQL 411

Query: 186 ASALRWFMLPLTRLGVPVSEIVLTLLLSLRFINLVFDEVRNAALGIVARRINWQQLTIME 365
           A A+RWFMLPL   GVPV+EI LTLLLSLRF++LVFDEVRN ALGIV+RRINWQ LT ME
Sbjct: 412 AFAIRWFMLPLGYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGIVSRRINWQMLTTME 471

Query: 366 TVDVFFMYIGRIFKNIFSHSEKISQAMIVRGFRGDSNNHKIYLFSNSSIGMEDIISLLCL 545
           TVDVFF Y+ RIFKNIFSH+E+ISQAMIVRGFRGDS++HK+Y  SNSS  M +I+SLLCL
Sbjct: 472 TVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNSSSRMANILSLLCL 531

Query: 546 FGVI 557
            GVI
Sbjct: 532 IGVI 535


Top