BLASTX nr result

ID: Cimicifuga21_contig00034812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034812
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_04532939.1| leucine rich protein [Escherichia sp. 3_2_53F...    77   1e-12
emb|CCG94050.1| hypothetical protein MARHY0556 [Marinobacter hyd...    75   4e-12
ref|ZP_06187877.1| conserved hypothetical protein [Legionella lo...    47   4e-06
gb|ADI21113.1| hypothetical protein [uncultured gamma proteobact...    55   8e-06

>ref|ZP_04532939.1| leucine rich protein [Escherichia sp. 3_2_53FAA]
           gi|226903372|gb|EEH89631.1| leucine rich protein
           [Escherichia sp. 3_2_53FAA]
          Length = 56

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/56 (67%), Positives = 41/56 (73%)
 Frame = -2

Query: 217 LPKIPAYHLKLGQPTPSWPSLLRPSIAITRSTGILTCFPSTTLFSLALGTD*PCVD 50
           +P  PAY LK GQP+P   SLLRP  A+T STGILTCFPSTT F LALG D PC D
Sbjct: 1   MPGKPAYTLKPGQPSPGQHSLLRPPFAVTPSTGILTCFPSTTPFGLALGVDSPCPD 56


>emb|CCG94050.1| hypothetical protein MARHY0556 [Marinobacter hydrocarbonoclasticus
           ATCC 49840]
          Length = 60

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/58 (67%), Positives = 41/58 (70%)
 Frame = -2

Query: 223 PDLPKIPAYHLKLGQPTPSWPSLLRPSIAITRSTGILTCFPSTTLFSLALGTD*PCVD 50
           PDLPK   Y LK GQP+P  PSLLR SIA  + TGILT FPSTT F LALG D PC D
Sbjct: 3   PDLPKSTPYMLKPGQPSPGSPSLLRLSIAAIQGTGILTRFPSTTPFGLALGADSPCAD 60


>ref|ZP_06187877.1| conserved hypothetical protein [Legionella longbeachae D-4968]
           gi|269987560|gb|EEZ93815.1| conserved hypothetical
           protein [Legionella longbeachae D-4968]
          Length = 157

 Score = 46.6 bits (109), Expect(2) = 4e-06
 Identities = 22/33 (66%), Positives = 25/33 (75%)
 Frame = -2

Query: 148 PSIAITRSTGILTCFPSTTLFSLALGTD*PCVD 50
           P+  + +S GILT FPSTTLFSLALG D PC D
Sbjct: 125 PTSPLIKSPGILTWFPSTTLFSLALGADSPCSD 157



 Score = 28.9 bits (63), Expect(2) = 4e-06
 Identities = 16/28 (57%), Positives = 16/28 (57%)
 Frame = -3

Query: 222 RIYLRFQPTTLNLDNQRQAGLAFSVPPS 139
           RI L   PT    DNQR A LAF VP S
Sbjct: 100 RICLNHPPTCTYQDNQRLAHLAFFVPTS 127


>gb|ADI21113.1| hypothetical protein [uncultured gamma proteobacterium EB750_07C09]
          Length = 46

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/37 (75%), Positives = 28/37 (75%)
 Frame = +3

Query: 75  KARLKSVVDGKQVNIPVLLVIAMEGRRRLGQLGVGCP 185
           KAR K VVDGK VNIPVL V AM GRRRL   GVGCP
Sbjct: 6   KARPKGVVDGKLVNIPVLCVTAMRGRRRLDLPGVGCP 42


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