BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00034757
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]   124   6e-27
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              123   1e-26
emb|CCH50966.1| T4.5 [Malus x robusta]                                122   2e-26
emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]   122   4e-26
emb|CAN83798.1| hypothetical protein VITISV_039072 [Vitis vinifera]   121   7e-26

>emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]
          Length = 1044

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/122 (51%), Positives = 77/122 (63%)
 Frame = +2

Query: 8   HPMSTRSKRGIYKPKALSTIKYPLSPFSPLCFSANIHDETTVPTCYMQASKYPQWRQAMV 187
           H M+TRS   I+KPK L T+     P  PL            PTC  QA  +P+W +AM 
Sbjct: 492 HSMTTRSMNNIFKPKQLHTVSKHYLPL-PL-----------EPTCVTQAVSHPEWXEAMS 539

Query: 188 DEFNALQQTGTWILVPPCSSQKPVGCKWVFRVKYKADGSVDRYKAQLVAKGYHQQSGIDY 367
            E  AL + GTW L+PP  +  PVGCKWVFRVK K DGSVD++KA+LVAKGY+QQ G+DY
Sbjct: 540 SELTALMRHGTWDLIPPPINCHPVGCKWVFRVKRKVDGSVDKFKARLVAKGYNQQPGVDY 599

Query: 368 TE 373
            E
Sbjct: 600 NE 601


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  123 bits (309), Expect = 1e-26
 Identities = 64/118 (54%), Positives = 76/118 (64%)
 Frame = +2

Query: 20   TRSKRGIYKPKALSTIKYPLSPFSPLCFSANIHDETTVPTCYMQASKYPQWRQAMVDEFN 199
            TRSK GI KP     +   L    PL            PTCY QA+KYP+WR+AM  EF 
Sbjct: 848  TRSKHGISKPNPKYAMHSTLLAL-PL-----------EPTCYTQAAKYPEWREAMDHEFK 895

Query: 200  ALQQTGTWILVPPCSSQKPVGCKWVFRVKYKADGSVDRYKAQLVAKGYHQQSGIDYTE 373
            ALQQ GTW LVPP S    +  KWVFR+K ++DGSV+RYKA+LVA G+HQQ G+DYTE
Sbjct: 896  ALQQAGTWFLVPPSSLMNILPNKWVFRIKKRSDGSVERYKARLVANGFHQQEGLDYTE 953


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/125 (48%), Positives = 83/125 (66%), Gaps = 3/125 (2%)
 Frame = +2

Query: 8    HPMSTRSKRGIYKPKALSTIKYPLSPFSPLCFSANIHDETTVP---TCYMQASKYPQWRQ 178
            H M TR+K GI+KPK  +  K+ L         + +   T +P   + ++QASK   W +
Sbjct: 1112 HTMITRAKAGIHKPKVFTATKHQLP--------STVDSLTALPPTPSTFLQASKSSHWME 1163

Query: 179  AMVDEFNALQQTGTWILVPPCSSQKPVGCKWVFRVKYKADGSVDRYKAQLVAKGYHQQSG 358
            AM  EF ALQ TGTW LVP  S+   VGCKWVF+VK+K DG+++RYKA+LVAKG+HQQ G
Sbjct: 1164 AMQFEFQALQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEG 1223

Query: 359  IDYTE 373
            +D++E
Sbjct: 1224 LDFSE 1228


>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
          Length = 1442

 Score =  122 bits (305), Expect = 4e-26
 Identities = 64/124 (51%), Positives = 78/124 (62%), Gaps = 1/124 (0%)
 Frame = +2

Query: 5    VHPMSTRSKRGIYKPKALSTI-KYPLSPFSPLCFSANIHDETTVPTCYMQASKYPQWRQA 181
            +H M+TRS   I+KPK L  + K+P+    PL            PTC  QA  +PQWR A
Sbjct: 835  LHKMTTRSMNNIFKPKQLHLVSKHPI----PLAIE---------PTCATQAVNHPQWRDA 881

Query: 182  MVDEFNALQQTGTWILVPPCSSQKPVGCKWVFRVKYKADGSVDRYKAQLVAKGYHQQSGI 361
            M  E  AL + GTW LVPP  +  PVGCKWVFRVK KADGSVD++K +LVAK Y Q+ G+
Sbjct: 882  MSTELTALMKHGTWDLVPPLPNCTPVGCKWVFRVKRKADGSVDKFKTRLVAKDYTQRPGL 941

Query: 362  DYTE 373
            DY E
Sbjct: 942  DYKE 945


>emb|CAN83798.1| hypothetical protein VITISV_039072 [Vitis vinifera]
          Length = 787

 Score =  121 bits (303), Expect = 7e-26
 Identities = 62/122 (50%), Positives = 75/122 (61%)
 Frame = +2

Query: 8   HPMSTRSKRGIYKPKALSTIKYPLSPFSPLCFSANIHDETTVPTCYMQASKYPQWRQAMV 187
           HPM TRSK  IYKPK L              + A+   +   PT Y QA+++  WRQAM 
Sbjct: 414 HPMVTRSKARIYKPKLLLAD-----------YGASSELDLFEPTTYHQAARHAHWRQAMD 462

Query: 188 DEFNALQQTGTWILVPPCSSQKPVGCKWVFRVKYKADGSVDRYKAQLVAKGYHQQSGIDY 367
            EF AL    TW LVPP   QK +GCKWVF++K K DGSV+ YKA+LVAKG+HQ  G+DY
Sbjct: 463 TEFYALLNNNTWTLVPPTLGQKVIGCKWVFKIKLKPDGSVECYKARLVAKGFHQTHGLDY 522

Query: 368 TE 373
            E
Sbjct: 523 FE 524